RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 NCAPGQ9BPX3 1015 aa15.3■□□□□ 0.04
SMG5-204ENST00000476954 FRMD8Q9BZ67 464 aaPredicted RBP15.3■□□□□ 0.04
SMG5-204ENST00000476954 ABCA2Q9BZC7 2435 aa15.3■□□□□ 0.04
SMG5-204ENST00000476954 ACTL8Q9H568 366 aa15.3■□□□□ 0.04
SMG5-204ENST00000476954 PPP4R2Q9NY27 417 aa15.3■□□□□ 0.04
SMG5-204ENST00000476954 PPARGC1AQ9UBK2 798 aaKnown RBP15.3■□□□□ 0.04
SMG5-204ENST00000476954 HPCAL4Q9UM19 191 aa15.3■□□□□ 0.04
SMG5-204ENST00000476954 FAM72CH0Y354 149 aa15.29■□□□□ 0.04
SMG5-204ENST00000476954 MAP3K6O95382 1288 aa15.29■□□□□ 0.04
SMG5-204ENST00000476954 ETFBP38117 255 aa15.29■□□□□ 0.04
SMG5-204ENST00000476954 CYTH1Q15438 398 aa15.29■□□□□ 0.04
SMG5-204ENST00000476954 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.29■□□□□ 0.04
SMG5-204ENST00000476954 FAM72AQ5TYM5 149 aa15.29■□□□□ 0.04
SMG5-204ENST00000476954 FAM72DQ6L9T8 149 aa15.29■□□□□ 0.04
SMG5-204ENST00000476954 RWDD4Q6NW29 188 aaKnown RBP15.29■□□□□ 0.04
SMG5-204ENST00000476954 FAM72BQ86X60 149 aa15.29■□□□□ 0.04
SMG5-204ENST00000476954 EHBP1Q8NDI1 1231 aa15.29■□□□□ 0.04
SMG5-204ENST00000476954 LURAP1Q96LR2 239 aa15.29■□□□□ 0.04
SMG5-204ENST00000476954 ING2Q9H160 280 aa15.29■□□□□ 0.04
SMG5-204ENST00000476954 MAGEH1Q9H213 219 aa15.29■□□□□ 0.04
SMG5-204ENST00000476954 AKIRIN1Q9H9L7 192 aaPredicted RBP15.29■□□□□ 0.04
SMG5-204ENST00000476954 ACSS2Q9NR19 701 aa15.29■□□□□ 0.04
SMG5-204ENST00000476954 STAP1Q9ULZ2 295 aa15.29■□□□□ 0.04
SMG5-204ENST00000476954 NEU3Q9UQ49 428 aa15.29■□□□□ 0.04
SMG5-204ENST00000476954 HPSEQ9Y251 543 aa15.29■□□□□ 0.04
SMG5-204ENST00000476954 PCDHGA6Q9Y5G7 932 aa15.29■□□□□ 0.04
SMG5-204ENST00000476954 NIPBLQ6KC79 2804 aaeCLIP15.28■□□□□ 0.047e-10■□□□□ 9.7
SMG5-204ENST00000476954 A0A1B0GTL3 188 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 ZSCAN5CA6NGD5 496 aaPredicted RBP15.28■□□□□ 0.04
SMG5-204ENST00000476954 BECN2A8MW95 431 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 PMM2O15305 246 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 DPM1O60762 260 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 LRCH4O75427 683 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 F9P00740 461 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 HNRNPH3P31942 346 aaKnown RBP15.28■□□□□ 0.04
SMG5-204ENST00000476954 PRCPP42785 496 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 FASLGP48023 281 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 FKBP3Q00688 224 aaKnown RBP15.28■□□□□ 0.04
SMG5-204ENST00000476954 NFATC2Q13469 925 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 IL10RAQ13651 578 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 CHRNA6Q15825 494 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 MANEALQ5VSG8 457 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 GJB7Q6PEY0 223 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 DOK6Q6PKX4 331 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 ZNF354CQ86Y25 554 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 HCAR2Q8TDS4 363 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 PNPLA2Q96AD5 504 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 NUDT9Q9BW91 350 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 NOL6Q9H6R4 1146 aaKnown RBP15.28■□□□□ 0.04
SMG5-204ENST00000476954 UBE2TQ9NPD8 197 aaPredicted RBP15.28■□□□□ 0.04
SMG5-204ENST00000476954 PLCB1Q9NQ66 1216 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 TMEM248Q9NWD8 314 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 USP25Q9UHP3 1055 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 LNPEPQ9UIQ6 1025 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 ZNF451Q9Y4E5 1061 aa15.28■□□□□ 0.04
SMG5-204ENST00000476954 PRSS44E7EML9 344 aa15.27■□□□□ 0.04
SMG5-204ENST00000476954 PDE2AO00408 941 aaPredicted RBP15.27■□□□□ 0.04
SMG5-204ENST00000476954 RAMP2O60895 175 aa15.27■□□□□ 0.04
SMG5-204ENST00000476954 NDUFA10O95299 355 aa15.27■□□□□ 0.04
SMG5-204ENST00000476954 RECKO95980 971 aa15.27■□□□□ 0.04
SMG5-204ENST00000476954 ELFN1P0C7U0 828 aa15.27■□□□□ 0.04
SMG5-204ENST00000476954 RHOQP17081 205 aa15.27■□□□□ 0.04
SMG5-204ENST00000476954 FLT3P36888 993 aa15.27■□□□□ 0.04
SMG5-204ENST00000476954 PTGIRP43119 386 aa15.27■□□□□ 0.04
SMG5-204ENST00000476954 MAPKAPK2P49137 400 aa15.27■□□□□ 0.04
SMG5-204ENST00000476954 GFERP55789 205 aa15.27■□□□□ 0.04
SMG5-204ENST00000476954 ITGA1P56199 1179 aa15.27■□□□□ 0.04
SMG5-204ENST00000476954 CDK18Q07002 472 aa15.27■□□□□ 0.04
SMG5-204ENST00000476954 ACOX1Q15067 660 aa15.27■□□□□ 0.04
SMG5-204ENST00000476954 SLC25A52Q3SY17 297 aa15.27■□□□□ 0.04
SMG5-204ENST00000476954 PLEKHN1Q494U1 663 aaPredicted RBP15.27■□□□□ 0.04
SMG5-204ENST00000476954 RASGRP3Q8IV61 690 aa15.27■□□□□ 0.04
SMG5-204ENST00000476954 FDCSPQ8NFU4 85 aa15.27■□□□□ 0.04
SMG5-204ENST00000476954 FNIP1Q8TF40 1166 aa15.27■□□□□ 0.04
SMG5-204ENST00000476954 OR6C1Q96RD1 312 aa15.27■□□□□ 0.04
SMG5-204ENST00000476954 TEX101Q9BY14 249 aa15.27■□□□□ 0.04
SMG5-204ENST00000476954 SCAND2PQ9GZW5 306 aaPredicted RBP15.27■□□□□ 0.04
SMG5-204ENST00000476954 SYNCQ9H7C4 482 aa15.27■□□□□ 0.04
SMG5-204ENST00000476954 PHPT1Q9NRX4 125 aaPredicted RBP15.27■□□□□ 0.04
SMG5-204ENST00000476954 DCHS2Q6V1P9 2916 aa15.27■□□□□ 0.03
SMG5-204ENST00000476954 PCSK5Q92824 1860 aa15.27■□□□□ 0.03
SMG5-204ENST00000476954 ZGRF1Q86YA3 2104 aa15.26■□□□□ 0.03
SMG5-204ENST00000476954 CFAP69A5D8W1 941 aa15.26■□□□□ 0.03
SMG5-204ENST00000476954 LRRTM2O43300 516 aa15.26■□□□□ 0.03
SMG5-204ENST00000476954 ZG16O60844 167 aa15.26■□□□□ 0.03
SMG5-204ENST00000476954 CEACAM4O75871 244 aa15.26■□□□□ 0.03
SMG5-204ENST00000476954 TIAF1O95411 115 aa15.26■□□□□ 0.03
SMG5-204ENST00000476954 USP8P40818 1118 aa15.26■□□□□ 0.03
SMG5-204ENST00000476954 RGRP47804 291 aa15.26■□□□□ 0.03
SMG5-204ENST00000476954 SEPHS1P49903 392 aa15.26■□□□□ 0.03
SMG5-204ENST00000476954 ZRSR2Q15696 482 aaKnown RBP15.26■□□□□ 0.03
SMG5-204ENST00000476954 UGT8Q16880 541 aa15.26■□□□□ 0.03
SMG5-204ENST00000476954 CFAP58Q5T655 872 aa15.26■□□□□ 0.03
SMG5-204ENST00000476954 AFMIDQ63HM1 303 aa15.26■□□□□ 0.03
SMG5-204ENST00000476954 FAM199XQ6PEV8 388 aaPredicted RBP15.26■□□□□ 0.03
SMG5-204ENST00000476954 BRAT1Q6PJG6 821 aa15.26■□□□□ 0.03
SMG5-204ENST00000476954 SFRP1Q8N474 314 aa15.26■□□□□ 0.03
SMG5-204ENST00000476954 TSG101Q99816 390 aa15.26■□□□□ 0.03
SMG5-204ENST00000476954 TBC1D10AQ9BXI6 508 aa15.26■□□□□ 0.03
SMG5-204ENST00000476954 LHX9Q9NQ69 397 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms