RNA–Protein interactions for RNA: ENST00000476650.2

ALMS1-203, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 1 (best)

Gene ALMS1, Length 239 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-203ENST00000476650 MMP2P08253 660 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 MYOD1P15172 320 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 S1PR1P21453 382 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 RRM1P23921 792 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 BDKRB2P30411 391 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 TRAPPC10P48553 1259 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 NR0B1P51843 470 aaKnown RBP3.03□□□□□ -1.92
ALMS1-203ENST00000476650 FCN2Q15485 313 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 TCTN1Q2MV58 587 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 GRAMD1BQ3KR37 738 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 TMEM30BQ3MIR4 351 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 SIRPB2Q5JXA9 342 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 ANO1Q5XXA6 986 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 TRNP1Q6NT89 227 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 ANKRD54Q6NXT1 300 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 KCTD18Q6PI47 426 aaPredicted RBP3.03□□□□□ -1.92
ALMS1-203ENST00000476650 FBXO46Q6PJ61 603 aaPredicted RBP3.03□□□□□ -1.92
ALMS1-203ENST00000476650 CPLX2Q6PUV4 134 aaKnown RBP3.03□□□□□ -1.92
ALMS1-203ENST00000476650 SLC22A25Q6T423 547 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 CEACAM20Q6UY09 585 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 MYPOPQ86VE0 399 aaPredicted RBP3.03□□□□□ -1.92
ALMS1-203ENST00000476650 FOXRED2Q8IWF2 684 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 SPICE1Q8N0Z3 855 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 BEST2Q8NFU1 509 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 CCT6BQ92526 530 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 TAF15Q92804 592 aaKnown RBP eCLIP3.03□□□□□ -1.92
ALMS1-203ENST00000476650 ABTB1Q969K4 478 aaPredicted RBP3.03□□□□□ -1.92
ALMS1-203ENST00000476650 LRRC1Q9BTT6 524 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 POLR3CQ9BUI4 534 aaPredicted RBP3.03□□□□□ -1.92
ALMS1-203ENST00000476650 KLHL1Q9NR64 748 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 KIAA1456Q9P272 454 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 FBXO9Q9UK97 447 aaPredicted RBP3.03□□□□□ -1.92
ALMS1-203ENST00000476650 TTC7AQ9ULT0 858 aaPredicted RBP3.03□□□□□ -1.92
ALMS1-203ENST00000476650 KCNK7Q9Y2U2 307 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 LOXL2Q9Y4K0 774 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 LAS1LQ9Y4W2 734 aaKnown RBP3.03□□□□□ -1.92
ALMS1-203ENST00000476650 STON1Q9Y6Q2 735 aa3.03□□□□□ -1.92
ALMS1-203ENST00000476650 TMEM202A6NGA9 273 aa3.02□□□□□ -1.93
ALMS1-203ENST00000476650 IFRD1O00458 451 aaPredicted RBP3.02□□□□□ -1.93
ALMS1-203ENST00000476650 CORO1AP31146 461 aaKnown RBP3.02□□□□□ -1.93
ALMS1-203ENST00000476650 AMPHP49418 695 aa3.02□□□□□ -1.93
ALMS1-203ENST00000476650 PPM1FP49593 454 aaPredicted RBP3.02□□□□□ -1.93
ALMS1-203ENST00000476650 SORDQ00796 357 aa3.02□□□□□ -1.93
ALMS1-203ENST00000476650 ZNF876PQ49A33 203 aa3.02□□□□□ -1.93
ALMS1-203ENST00000476650 LCTLQ6UWM7 567 aa3.02□□□□□ -1.93
ALMS1-203ENST00000476650 MTSS1LQ765P7 747 aa3.02□□□□□ -1.93
ALMS1-203ENST00000476650 HERC6Q8IVU3 1022 aa3.02□□□□□ -1.93
ALMS1-203ENST00000476650 SLC35F3Q8IY50 421 aa3.02□□□□□ -1.93
ALMS1-203ENST00000476650 SRBD1Q8N5C6 995 aaKnown RBP3.02□□□□□ -1.93
ALMS1-203ENST00000476650 ZBTB2Q8N680 514 aa3.02□□□□□ -1.93
ALMS1-203ENST00000476650 TNIP2Q8NFZ5 429 aa3.02□□□□□ -1.93
ALMS1-203ENST00000476650 FAM76AQ8TAV0 307 aa3.02□□□□□ -1.93
ALMS1-203ENST00000476650 SPPL3Q8TCT6 385 aa3.02□□□□□ -1.93
ALMS1-203ENST00000476650 PPM1EQ8WY54 764 aa3.02□□□□□ -1.93
ALMS1-203ENST00000476650 ANKRD9Q96BM1 317 aaPredicted RBP3.02□□□□□ -1.93
ALMS1-203ENST00000476650 SLC39A13Q96H72 371 aa3.02□□□□□ -1.93
ALMS1-203ENST00000476650 FSD1Q9BTV5 496 aa3.02□□□□□ -1.93
ALMS1-203ENST00000476650 HEMGNQ9BXL5 484 aa3.02□□□□□ -1.93
ALMS1-203ENST00000476650 MKKSQ9NPJ1 570 aaPredicted RBP3.02□□□□□ -1.93
ALMS1-203ENST00000476650 RASSF1Q9NS23 344 aa3.02□□□□□ -1.93
ALMS1-203ENST00000476650 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.02□□□□□ -1.93
ALMS1-203ENST00000476650 OR2W1Q9Y3N9 320 aa3.02□□□□□ -1.93
ALMS1-203ENST00000476650 LSM4Q9Y4Z0 139 aaKnown RBP3.02□□□□□ -1.93
ALMS1-203ENST00000476650 TSPAN3O60637 253 aa3.01□□□□□ -1.93
ALMS1-203ENST00000476650 WDR1O75083 606 aa3.01□□□□□ -1.93
ALMS1-203ENST00000476650 GALTP07902 379 aa3.01□□□□□ -1.93
ALMS1-203ENST00000476650 CNPP09543 421 aaKnown RBP3.01□□□□□ -1.93
ALMS1-203ENST00000476650 CD53P19397 219 aa3.01□□□□□ -1.93
ALMS1-203ENST00000476650 HOXA1P49639 335 aaPredicted RBP3.01□□□□□ -1.93
ALMS1-203ENST00000476650 HNRNPH2P55795 449 aaKnown RBP3.01□□□□□ -1.93
ALMS1-203ENST00000476650 EFNB1P98172 346 aa3.01□□□□□ -1.93
ALMS1-203ENST00000476650 GTF2H2Q13888 395 aa3.01□□□□□ -1.93
ALMS1-203ENST00000476650 NFIL3Q16649 462 aa3.01□□□□□ -1.93
ALMS1-203ENST00000476650 SLC35E4Q6ICL7 350 aa3.01□□□□□ -1.93
ALMS1-203ENST00000476650 GTF2H2CQ6P1K8 395 aa3.01□□□□□ -1.93
ALMS1-203ENST00000476650 CHERPQ8IWX8 916 aaKnown RBP3.01□□□□□ -1.93
ALMS1-203ENST00000476650 SUGP1Q8IWZ8 645 aaKnown RBP3.01□□□□□ -1.93
ALMS1-203ENST00000476650 DHX40Q8IX18 779 aaKnown RBP3.01□□□□□ -1.93
ALMS1-203ENST00000476650 C1orf87Q8N0U7 546 aa3.01□□□□□ -1.93
ALMS1-203ENST00000476650 SPEM1Q8N4L4 309 aa3.01□□□□□ -1.93
ALMS1-203ENST00000476650 ANKRD42Q8N9B4 389 aa3.01□□□□□ -1.93
ALMS1-203ENST00000476650 USP38Q8NB14 1042 aa3.01□□□□□ -1.93
ALMS1-203ENST00000476650 MYRIPQ8NFW9 859 aa3.01□□□□□ -1.93
ALMS1-203ENST00000476650 CADM4Q8NFZ8 388 aa3.01□□□□□ -1.93
ALMS1-203ENST00000476650 OR2AK2Q8NG84 335 aa3.01□□□□□ -1.93
ALMS1-203ENST00000476650 SYT17Q9BSW7 474 aa3.01□□□□□ -1.93
ALMS1-203ENST00000476650 MAF1Q9H063 256 aa3.01□□□□□ -1.93
ALMS1-203ENST00000476650 TTYH1Q9H313 450 aaPredicted RBP3.01□□□□□ -1.93
ALMS1-203ENST00000476650 ESRP2Q9H6T0 727 aaKnown RBP3.01□□□□□ -1.93
ALMS1-203ENST00000476650 PPP1R3EQ9H7J1 279 aa3.01□□□□□ -1.93
ALMS1-203ENST00000476650 FKRPQ9H9S5 495 aa3.01□□□□□ -1.93
ALMS1-203ENST00000476650 TMEM30AQ9NV96 361 aa3.01□□□□□ -1.93
ALMS1-203ENST00000476650 GOLGA6L9A6NEM1 432 aa3□□□□□ -1.93
ALMS1-203ENST00000476650 EXTL3O43909 919 aa3□□□□□ -1.93
ALMS1-203ENST00000476650 NBNO60934 754 aa3□□□□□ -1.93
ALMS1-203ENST00000476650 TACC1O75410 805 aa3□□□□□ -1.93
ALMS1-203ENST00000476650 MT-CYBP00156 380 aaPredicted RBP3□□□□□ -1.93
ALMS1-203ENST00000476650 AGAP20933 346 aa3□□□□□ -1.93
ALMS1-203ENST00000476650 EEF1A1P68104 462 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms