RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 ATP2A1O14983 1001 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 ADAMDEC1O15204 470 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 MITFO75030 526 aaPredicted RBP6.04□□□□□ -1.44
VPS50-212ENST00000476413 ZC3H11AO75152 810 aaKnown RBP eCLIP6.04□□□□□ -1.44
VPS50-212ENST00000476413 MTA2O94776 668 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 CSPG5O95196 566 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 EIF2S3P41091 472 aaKnown RBP6.04□□□□□ -1.44
VPS50-212ENST00000476413 METAP2P50579 478 aaKnown RBP eCLIP6.04□□□□□ -1.44
VPS50-212ENST00000476413 MRPS5P82675 430 aaKnown RBP6.04□□□□□ -1.44
VPS50-212ENST00000476413 ZBED6P86452 979 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 LRMPQ12912 555 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 CTTNQ14247 550 aaKnown RBP6.04□□□□□ -1.44
VPS50-212ENST00000476413 HNF4GQ14541 408 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 NTRK2Q16620 822 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 ZNF280DQ6N043 979 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 NAA16Q6N069 864 aaPredicted RBP6.04□□□□□ -1.44
VPS50-212ENST00000476413 DENND5BQ6ZUT9 1274 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 TRAPPC11Q7Z392 1133 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 AACSQ86V21 672 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 SPATA6LQ8N4H0 392 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 NANOGP1Q8N7R0 232 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 TRPC4APQ8TEL6 797 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 PRPF31Q8WWY3 499 aaKnown RBP6.04□□□□□ -1.44
VPS50-212ENST00000476413 LRRC59Q96AG4 307 aaKnown RBP6.04□□□□□ -1.44
VPS50-212ENST00000476413 CCDC34Q96HJ3 373 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 EGLN2Q96KS0 407 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 ABHD1Q96SE0 405 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 GAD1Q99259 594 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 HAUS8Q9BT25 410 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 SPRY4Q9C004 299 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 MMP25Q9NPA2 562 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 KRCC1Q9NPI7 259 aaPredicted RBP6.04□□□□□ -1.44
VPS50-212ENST00000476413 OR6C3Q9NZP0 311 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 C11orf21Q9P2W6 132 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 GIMAP2Q9UG22 337 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 MAGED1Q9Y5V3 778 aaPredicted RBP6.04□□□□□ -1.44
VPS50-212ENST00000476413 IGLV5-39A0A0G2JS06 123 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 GLOD5A6NK44 160 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 KDM4EB2RXH2 506 aaPredicted RBP6.03□□□□□ -1.44
VPS50-212ENST00000476413 MS4A18H0YCH9 400 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 H0YGN5 161 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 UBE2CO00762 179 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 DAB1O75553 588 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 ANXA7P20073 488 aaKnown RBP6.03□□□□□ -1.44
VPS50-212ENST00000476413 GPTP24298 496 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 CD38P28907 300 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 ME1P48163 572 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 SUOXP51687 545 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 PNLIPRP2P54317 469 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 MRPS34P82930 218 aaKnown RBP6.03□□□□□ -1.44
VPS50-212ENST00000476413 TFAP4Q01664 338 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 GPR18Q14330 331 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 PTGR1Q14914 329 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 EFNB3Q15768 340 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 SMN1Q16637 294 aaKnown RBP6.03□□□□□ -1.44
VPS50-212ENST00000476413 EIF2S3LQ2VIR3 472 aaKnown RBP6.03□□□□□ -1.44
VPS50-212ENST00000476413 MANEAQ5SRI9 462 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 RARS2Q5T160 578 aaKnown RBP6.03□□□□□ -1.44
VPS50-212ENST00000476413 GPR139Q6DWJ6 353 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 SYCE2Q6PIF2 218 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 MON1BQ7L1V2 547 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 CCDC191Q8NCU4 936 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 TRIB2Q92519 343 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 LPAR1Q92633 364 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 SLC25A28Q96A46 364 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 PPP1R3EQ9H7J1 279 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 PLAC1Q9HBJ0 212 aa6.03□□□□□ -1.44
VPS50-212ENST00000476413 R3HDM2Q9Y2K5 976 aaKnown RBP6.03□□□□□ -1.44
VPS50-212ENST00000476413 SRPRBQ9Y5M8 271 aaKnown RBP6.03□□□□□ -1.44
VPS50-212ENST00000476413 G6PDP11413 515 aa6.02□□□□□ -1.45
VPS50-212ENST00000476413 HOXB2P14652 356 aa6.02□□□□□ -1.45
VPS50-212ENST00000476413 CD58P19256 250 aa6.02□□□□□ -1.45
VPS50-212ENST00000476413 TRIM21P19474 475 aaKnown RBP6.02□□□□□ -1.45
VPS50-212ENST00000476413 MMP13P45452 471 aa6.02□□□□□ -1.45
VPS50-212ENST00000476413 NANOS3P60323 173 aaKnown RBP6.02□□□□□ -1.45
VPS50-212ENST00000476413 SPOCK1Q08629 439 aa6.02□□□□□ -1.45
VPS50-212ENST00000476413 COLEC12Q5KU26 742 aa6.02□□□□□ -1.45
VPS50-212ENST00000476413 B3GNT6Q6ZMB0 384 aa6.02□□□□□ -1.45
VPS50-212ENST00000476413 FOXRED2Q8IWF2 684 aa6.02□□□□□ -1.45
VPS50-212ENST00000476413 HACE1Q8IYU2 909 aa6.02□□□□□ -1.45
VPS50-212ENST00000476413 TMEM199Q8N511 208 aa6.02□□□□□ -1.45
VPS50-212ENST00000476413 AADATQ8N5Z0 425 aa6.02□□□□□ -1.45
VPS50-212ENST00000476413 KCTD6Q8NC69 237 aa6.02□□□□□ -1.45
VPS50-212ENST00000476413 PAFAH2Q99487 392 aa6.02□□□□□ -1.45
VPS50-212ENST00000476413 PCGF1Q9BSM1 259 aa6.02□□□□□ -1.45
VPS50-212ENST00000476413 HRH4Q9H3N8 390 aa6.02□□□□□ -1.45
VPS50-212ENST00000476413 CATSPERBQ9H7T0 1116 aa6.02□□□□□ -1.45
VPS50-212ENST00000476413 SLC9A2Q9UBY0 812 aa6.02□□□□□ -1.45
VPS50-212ENST00000476413 ZNF711Q9Y462 761 aa6.02□□□□□ -1.45
VPS50-212ENST00000476413 AKR1B15C9JRZ8 316 aaPredicted RBP6.01□□□□□ -1.45
VPS50-212ENST00000476413 OGG1O15527 345 aa6.01□□□□□ -1.45
VPS50-212ENST00000476413 ICAM1P05362 532 aa6.01□□□□□ -1.45
VPS50-212ENST00000476413 SAT1P21673 171 aa6.01□□□□□ -1.45
VPS50-212ENST00000476413 FBLP22087 321 aaKnown RBP6.01□□□□□ -1.45
VPS50-212ENST00000476413 HNRNPH1P31943 449 aaKnown RBP6.01□□□□□ -1.45
VPS50-212ENST00000476413 PPP5CP53041 499 aa6.01□□□□□ -1.45
VPS50-212ENST00000476413 RRP1P56182 461 aaKnown RBP6.01□□□□□ -1.45
VPS50-212ENST00000476413 NEDD9Q14511 834 aa6.01□□□□□ -1.45
VPS50-212ENST00000476413 RABEP1Q15276 862 aa6.01□□□□□ -1.45
VPS50-212ENST00000476413 RASA2Q15283 850 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms