RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 Q6ZSR6 202 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 ARHGEF18Q6ZSZ5 1173 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 HDXQ7Z353 690 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 HOOK3Q86VS8 718 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 SLC25A45Q8N413 288 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 CENPTQ96BT3 561 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 TSGA13Q96PP4 275 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 MYOCQ99972 504 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 USP29Q9HBJ7 922 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 HAUS2Q9NVX0 235 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 GRHL1Q9NZI5 618 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 ITM2BQ9Y287 266 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 PKD1L2Q7Z442 2459 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 DFFAO00273 331 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 MAP3K6O95382 1288 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 LDOC1O95751 146 aaPredicted RBP15.69■□□□□ 0.1
CPSF3-203ENST00000475482 C1SP09871 688 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 GIMD1P0DJR0 217 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 RPL22P35268 128 aaKnown RBP15.69■□□□□ 0.1
CPSF3-203ENST00000475482 FDFT1P37268 417 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 TNNT3P45378 269 aaPredicted RBP15.69■□□□□ 0.1
CPSF3-203ENST00000475482 RGRP47804 291 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 GDF10P55107 478 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 PFN3P60673 137 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 IL10RBQ08334 325 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 NSUN2Q08J23 767 aaKnown RBP eCLIP15.69■□□□□ 0.1
CPSF3-203ENST00000475482 RFTN1Q14699 578 aaPredicted RBP15.69■□□□□ 0.1
CPSF3-203ENST00000475482 GRM3Q14832 879 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 SLMAPQ14BN4 828 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 PPP1R21Q6ZMI0 780 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 TTC7BQ86TV6 843 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 PPIL6Q8IXY8 311 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 CCDC13Q8IYE1 715 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 EID2Q8N6I1 236 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 NSMCE1Q8WV22 266 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 CNDP2Q96KP4 475 aaKnown RBP15.69■□□□□ 0.1
CPSF3-203ENST00000475482 ZNF641Q96N77 438 aaPredicted RBP15.69■□□□□ 0.1
CPSF3-203ENST00000475482 PPP1R2P1Q96PQ5 205 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 TUBGCP5Q96RT8 1024 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 LGMNQ99538 433 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 FRMD8Q9BZ67 464 aaPredicted RBP15.69■□□□□ 0.1
CPSF3-203ENST00000475482 SUV39H2Q9H5I1 410 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 TRHDEQ9UKU6 1024 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 SHOC2Q9UQ13 582 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 CHD6Q8TD26 2715 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 CFAP47Q6ZTR5 3102 aa15.69■□□□□ 0.1
CPSF3-203ENST00000475482 SPTY2D1-AS1A0A0U1RR47 76 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 PIAS2O75928 621 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 KRT37O76014 449 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 PEX11BO96011 259 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 CDK4P11802 303 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 DGKAP23743 735 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 IVDP26440 423 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 RABIFP47224 123 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 ACADVLP49748 655 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 ITGA8P53708 1063 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 SGCGQ13326 291 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 CAMK2BQ13554 666 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 FZD2Q14332 565 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 PROX2Q3B8N5 592 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 TMEM52BQ4KMG9 183 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 ITPRIPL1Q6GPH6 555 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 ARHGAP36Q6ZRI8 547 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 TP53INP2Q8IXH6 220 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 GALNT15Q8N3T1 639 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 TSEN2Q8NCE0 465 aaKnown RBP15.68■□□□□ 0.1
CPSF3-203ENST00000475482 FBXO25Q8TCJ0 367 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 SPOCK2Q92563 424 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 FATE1Q969F0 183 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 ECHDC3Q96DC8 303 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 EXOC2Q96KP1 924 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 SPATA13Q96N96 652 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 PSKH2Q96QS6 385 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 ACBD3Q9H3P7 528 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 ZDHHC18Q9NUE0 388 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 IPO11Q9UI26 975 aaKnown RBP15.68■□□□□ 0.1
CPSF3-203ENST00000475482 ZMIZ1Q9ULJ6 1067 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 ASXL3Q9C0F0 2248 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 MYLKQ15746 1914 aa15.68■□□□□ 0.1
CPSF3-203ENST00000475482 SHROOM3Q8TF72 1996 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 GOLGA6CA6NDK9 693 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 GOLGA6BA6NDN3 693 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 TRIM38O00635 465 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 FPGTO14772 594 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 SDC3O75056 442 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 NEBLO76041 1014 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 PIGNO95427 931 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 ZSCAN5DPP0CG00 497 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 GOLGA6DP0CG33 693 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 MYBL2P10244 700 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 ETS1P14921 441 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 BASP1P80723 227 aaKnown RBP15.67■□□□□ 0.1
CPSF3-203ENST00000475482 DNAJC3Q13217 504 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 AGERQ15109 404 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 TRADDQ15628 312 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 UGP2Q16851 508 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 TPRG1LQ5T0D9 272 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 HIBCHQ6NVY1 386 aaPredicted RBP15.67■□□□□ 0.1
CPSF3-203ENST00000475482 BRAT1Q6PJG6 821 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 MTERF4Q7Z6M4 381 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms