RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 RFWD3Q6PCD5 774 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 PTCHD4Q6ZW05 846 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 CEP68Q76N32 757 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 CFAP206Q8IYR0 622 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 DCBLD1Q8N8Z6 715 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 FAM98AQ8NCA5 519 aaKnown RBP10.97□□□□□ -0.65
VAPB-204ENST00000475243 TSPAN14Q8NG11 270 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 OR4K2Q8NGD2 314 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 AGAP11Q8TF27 550 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 PPCDCQ96CD2 204 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 BRINP2Q9C0B6 783 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 SLC35C2Q9NQQ7 365 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 ADGRE2Q9UHX3 823 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 FAM25EA8MYX2 175 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 AZIN1O14977 448 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 PTDSS1P48651 473 aaKnown RBP10.96□□□□□ -0.65
VAPB-204ENST00000475243 CDK18Q07002 472 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 MADCAM1Q13477 382 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 ABRAXAS1Q6UWZ7 409 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 ING5Q8WYH8 240 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 TMA7Q9Y2S6 64 aaKnown RBP10.96□□□□□ -0.65
VAPB-204ENST00000475243 VWA7Q9Y334 891 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 RAP2CQ9Y3L5 183 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 ACTL7BQ9Y614 415 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 PTPRJQ12913 1337 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 MROH2AA6NES4 1674 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 PSIP1O75475 530 aaKnown RBP10.96□□□□□ -0.65
VAPB-204ENST00000475243 GLUD1P00367 558 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 ZACNQ401N2 412 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 ARSHQ5FYA8 562 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 C9orf64Q5T6V5 341 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 GPR107Q5VW38 600 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 CIR1Q86X95 450 aaPredicted RBP10.96□□□□□ -0.65
VAPB-204ENST00000475243 PPTC7Q8NI37 304 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 FNIP1Q8TF40 1166 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 QKIQ96PU8 341 aaKnown RBP eCLIP10.96□□□□□ -0.652e-7■■■■■ 54.8
VAPB-204ENST00000475243 RACGAP1Q9H0H5 632 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 LRRC19Q9H756 370 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 CST3P01034 146 aaPredicted RBP10.96□□□□□ -0.65
VAPB-204ENST00000475243 SEC13P55735 322 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 TRIM40Q6P9F5 258 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 SH3RF1Q7Z6J0 888 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 MON1AQ86VX9 555 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 Q96MT0 163 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 LMAN2LQ9H0V9 348 aa10.96□□□□□ -0.65
VAPB-204ENST00000475243 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.96□□□□□ -0.66
VAPB-204ENST00000475243 ECDO95905 644 aaPredicted RBP10.96□□□□□ -0.66
VAPB-204ENST00000475243 TIMM50Q3ZCQ8 353 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 RGMBQ6NW40 437 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 RALGPS2Q86X27 583 aaPredicted RBP10.96□□□□□ -0.66
VAPB-204ENST00000475243 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.96□□□□□ -0.66
VAPB-204ENST00000475243 TRNT1Q96Q11 434 aaKnown RBP10.96□□□□□ -0.66
VAPB-204ENST00000475243 SLC17A7Q9P2U7 560 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 EFR3BQ9Y2G0 817 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 AP3M1Q9Y2T2 418 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 MYH3P11055 1940 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 DHRS12A0PJE2 317 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 TMCC2O75069 709 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 RNASEH2AO75792 299 aaKnown RBP10.96□□□□□ -0.66
VAPB-204ENST00000475243 ITGA2P17301 1181 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 ULK2Q8IYT8 1036 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 PSMA8Q8TAA3 256 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 ART4Q93070 314 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 ZNF607Q96SK3 696 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 ALKBH4Q9NXW9 302 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 CORO2BQ9UQ03 480 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 MYH15Q9Y2K3 1946 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 MGRN1O60291 552 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 TPP2P29144 1249 aaPredicted RBP10.96□□□□□ -0.66
VAPB-204ENST00000475243 AKT2P31751 481 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 SSR2P43308 183 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 PRKG2Q13237 762 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 PDK3Q15120 406 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 PDK4Q16654 411 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 MTX3Q5HYI7 312 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 PACS2Q86VP3 889 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 FAM129CQ86XR2 697 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 FUKQ8N0W3 1084 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 ATAD1Q8NBU5 361 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 TSSK3Q96PN8 268 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 C3orf18Q9UK00 162 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 PSMD13Q9UNM6 376 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 TRAF6Q9Y4K3 522 aa10.96□□□□□ -0.66
VAPB-204ENST00000475243 UGT2B4P06133 528 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 ANPEPP15144 967 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 OMPP47874 163 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 B3GNT6Q6ZMB0 384 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 LRRC55Q6ZSA7 311 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 KRT74Q7RTS7 529 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 IRF2BP2Q7Z5L9 587 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 EEF1AKMT1Q8WVE0 214 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 MYO19Q96H55 970 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 RNPEPL1Q9HAU8 725 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 SNX10Q9Y5X0 201 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 FAM92AA1XBS5 289 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 EME2A4GXA9 379 aaPredicted RBP10.95□□□□□ -0.66
VAPB-204ENST00000475243 WNT7AO00755 349 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 SLC22A3O75751 556 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 TOP3BO95985 862 aaKnown RBP10.95□□□□□ -0.66
VAPB-204ENST00000475243 GNRH1P01148 92 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms