RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 KCNAB2Q13303 367 aa13.98□□□□□ -0.17
CCDC78-209ENST00000474647 ZNF235Q14590 738 aa13.98□□□□□ -0.17
CCDC78-209ENST00000474647 RFTN1Q14699 578 aaPredicted RBP13.98□□□□□ -0.17
CCDC78-209ENST00000474647 SKIDA1Q1XH10 827 aa13.98□□□□□ -0.17
CCDC78-209ENST00000474647 RBM43Q6ZSC3 357 aaKnown RBP13.98□□□□□ -0.17
CCDC78-209ENST00000474647 RFX8Q6ZV50 586 aa13.98□□□□□ -0.17
CCDC78-209ENST00000474647 ARHGAP12Q8IWW6 846 aa13.98□□□□□ -0.17
CCDC78-209ENST00000474647 NRSN1Q8IZ57 195 aa13.98□□□□□ -0.17
CCDC78-209ENST00000474647 CACNA2D3Q8IZS8 1091 aa13.98□□□□□ -0.17
CCDC78-209ENST00000474647 NAGSQ8N159 534 aa13.98□□□□□ -0.17
CCDC78-209ENST00000474647 NPWQ8N729 165 aa13.98□□□□□ -0.17
CCDC78-209ENST00000474647 KCTD15Q96SI1 283 aaPredicted RBP13.98□□□□□ -0.17
CCDC78-209ENST00000474647 B3GNT4Q9C0J1 378 aa13.98□□□□□ -0.17
CCDC78-209ENST00000474647 ADNPQ9H2P0 1102 aa13.98□□□□□ -0.17
CCDC78-209ENST00000474647 KCNK4Q9NYG8 393 aa13.98□□□□□ -0.17
CCDC78-209ENST00000474647 SEPT3Q9UH03 358 aa13.98□□□□□ -0.17
CCDC78-209ENST00000474647 PCDHGC4Q9Y5F7 938 aa13.98□□□□□ -0.17
CCDC78-209ENST00000474647 B3GALT1Q9Y5Z6 326 aa13.98□□□□□ -0.17
CCDC78-209ENST00000474647 SPENQ96T58 3664 aaKnown RBP13.97□□□□□ -0.17
CCDC78-209ENST00000474647 NBASA2RRP1 2371 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 TNRC6AQ8NDV7 1962 aaKnown RBP13.97□□□□□ -0.17
CCDC78-209ENST00000474647 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.97□□□□□ -0.17
CCDC78-209ENST00000474647 TMCO5BA8MYB1 307 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 FUCA1P04066 466 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 THRAP10827 490 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 CSF2RBP32927 897 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 ACTR1BP42025 376 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 GPR3P46089 330 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 RENBPP51606 427 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 ACTR1AP61163 376 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 CTBSQ01459 385 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 SRSF1Q07955 248 aaKnown RBP eCLIP13.97□□□□□ -0.17
CCDC78-209ENST00000474647 NSUN2Q08J23 767 aaKnown RBP eCLIP13.97□□□□□ -0.17
CCDC78-209ENST00000474647 SLC10A7Q0GE19 358 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 LBRQ14739 615 aaKnown RBP13.97□□□□□ -0.17
CCDC78-209ENST00000474647 NR1D2Q14995 579 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 CLPPQ16740 277 aaPredicted RBP13.97□□□□□ -0.17
CCDC78-209ENST00000474647 ERMARDQ5T6L9 678 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 TMCO4Q5TGY1 634 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 CDKAL1Q5VV42 579 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 C17orf82Q86X59 251 aaPredicted RBP13.97□□□□□ -0.17
CCDC78-209ENST00000474647 ZNF761Q86XN6 746 aaPredicted RBP13.97□□□□□ -0.17
CCDC78-209ENST00000474647 MCOLN2Q8IZK6 566 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 AGBL5Q8NDL9 886 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 OR4D9Q8NGE8 314 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 ZNF564Q8TBZ8 553 aaPredicted RBP13.97□□□□□ -0.17
CCDC78-209ENST00000474647 DTD2Q96FN9 168 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 NSMCE3Q96MG7 304 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 PEBP4Q96S96 227 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 TEX101Q9BY14 249 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 FRMD8Q9BZ67 464 aaPredicted RBP13.97□□□□□ -0.17
CCDC78-209ENST00000474647 CDH19Q9H159 772 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 EPN3Q9H201 632 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 TRNAU1APQ9NX07 287 aaKnown RBP13.97□□□□□ -0.17
CCDC78-209ENST00000474647 SLC39A1Q9NY26 324 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 TMEM9Q9P0T7 183 aa13.97□□□□□ -0.17
CCDC78-209ENST00000474647 LRRK2Q5S007 2527 aa13.96□□□□□ -0.17
CCDC78-209ENST00000474647 IGHV1OR21-1A0A087WYE8 117 aa13.96□□□□□ -0.17
CCDC78-209ENST00000474647 EFCAB7A8K855 629 aa13.96□□□□□ -0.17
CCDC78-209ENST00000474647 PPM1DO15297 605 aa13.96□□□□□ -0.17
CCDC78-209ENST00000474647 RAD1O60671 282 aa13.96□□□□□ -0.17
CCDC78-209ENST00000474647 HEXIM1O94992 359 aaKnown RBP13.96□□□□□ -0.17
CCDC78-209ENST00000474647 CYP2A6P11509 494 aaPredicted RBP13.96□□□□□ -0.17
CCDC78-209ENST00000474647 NFKBIAP25963 317 aa13.96□□□□□ -0.17
CCDC78-209ENST00000474647 ADCY8P40145 1251 aa13.96□□□□□ -0.17
CCDC78-209ENST00000474647 CCR10P46092 362 aa13.96□□□□□ -0.17
CCDC78-209ENST00000474647 COPB1P53618 953 aaKnown RBP13.96□□□□□ -0.17
CCDC78-209ENST00000474647 TRA2AQ13595 282 aaKnown RBP eCLIP13.96□□□□□ -0.17
CCDC78-209ENST00000474647 PEX6Q13608 980 aa13.96□□□□□ -0.17
CCDC78-209ENST00000474647 SNAP47Q5SQN1 464 aa13.96□□□□□ -0.17
CCDC78-209ENST00000474647 ACAD10Q6JQN1 1059 aa13.96□□□□□ -0.17
CCDC78-209ENST00000474647 HSD11B1LQ7Z5J1 315 aa13.96□□□□□ -0.17
CCDC78-209ENST00000474647 TP53INP2Q8IXH6 220 aa13.96□□□□□ -0.17
CCDC78-209ENST00000474647 ENOX1Q8TC92 643 aaKnown RBP13.96□□□□□ -0.17
CCDC78-209ENST00000474647 AHCYL2Q96HN2 611 aaKnown RBP13.96□□□□□ -0.17
CCDC78-209ENST00000474647 PSKH2Q96QS6 385 aa13.96□□□□□ -0.17
CCDC78-209ENST00000474647 DDA1Q9BW61 102 aa13.96□□□□□ -0.17
CCDC78-209ENST00000474647 OCIAD1Q9NX40 245 aa13.96□□□□□ -0.17
CCDC78-209ENST00000474647 TAS2R14Q9NYV8 317 aa13.96□□□□□ -0.17
CCDC78-209ENST00000474647 CD84Q9UIB8 345 aa13.96□□□□□ -0.17
CCDC78-209ENST00000474647 PLEKHM1Q9Y4G2 1056 aa13.96□□□□□ -0.17
CCDC78-209ENST00000474647 PCDHGA3Q9Y5H0 932 aa13.96□□□□□ -0.17
CCDC78-209ENST00000474647 ST14Q9Y5Y6 855 aa13.96□□□□□ -0.17
CCDC78-209ENST00000474647 TRBV23OR9-2A0A075B6M9 112 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 NPIPB15A6NHN6 443 aaPredicted RBP13.95□□□□□ -0.18
CCDC78-209ENST00000474647 ZNF891A8MT65 544 aaPredicted RBP13.95□□□□□ -0.18
CCDC78-209ENST00000474647 A8MU76 341 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 EIF3CLB5ME19 914 aaKnown RBP13.95□□□□□ -0.18
CCDC78-209ENST00000474647 PRPSAP2O60256 369 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 SOCS5O75159 536 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 RNF8O76064 485 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 PRKAR1AP10644 381 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 CTPS1P17812 591 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 LHCGRP22888 699 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 GPR1P46091 355 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 MAXP61244 160 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 UBXN1Q04323 297 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 PTPRRQ15256 657 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 CT47A1Q5JQC4 288 aaPredicted RBP13.95□□□□□ -0.18
CCDC78-209ENST00000474647 DCAF12Q5T6F0 453 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms