RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 LPXNO60711 386 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 NDUFS2O75306 463 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 TGFAP01135 160 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 CTXN2P0C2S0 81 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 PRKCIP41743 596 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 TMPOP42166 694 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 CASP3P42574 277 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 PIK3CGP48736 1102 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 HDGFP51858 240 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 CAPZA1P52907 286 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 TAS2R60P59551 318 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 RAB4BP61018 213 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 NAA20P61599 178 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 PCDH1Q08174 1060 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 MRPL49Q13405 166 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 SLC35G1Q2M3R5 365 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 EML3Q32P44 896 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 EDRF1Q3B7T1 1238 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 NHSL2Q5HYW2 709 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 RNLSQ5VYX0 342 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 TTC33Q6PID6 262 aaPredicted RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 PRSS57Q6UWY2 283 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 NPNTQ6UXI9 565 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 H1FNTQ75WM6 255 aaPredicted RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 KANSL1Q7Z3B3 1105 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 NANPQ8TBE9 248 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 HAS2Q92819 552 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 APBB2Q92870 758 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 OTUB2Q96DC9 234 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 CCDC51Q96ER9 411 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 CYP2S1Q96SQ9 504 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 KCNS3Q9BQ31 491 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 CHID1Q9BWS9 393 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 SEMA4CQ9C0C4 833 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 MCOLN1Q9GZU1 580 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 TMEM117Q9H0C3 514 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 PNPLA3Q9NST1 481 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 C20orf96Q9NUD7 363 aaPredicted RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 BTG4Q9NY30 223 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.49□□□□□ -1.85
UBR3-208ENST00000474426 DLGAP2Q9P1A6 1054 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 CLEC2DQ9UHP7 191 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 SLC5A6Q9Y289 635 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 AAR2Q9Y312 384 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 SNX13Q9Y5W8 968 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 EIF3AQ14152 1382 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 A0A1B0GV90 55 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 SMIM23A6NLE4 172 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 EIF4E1BA6NMX2 242 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 EFCAB7A8K855 629 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 ARVCFO00192 962 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 SPINT1O43278 529 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 ARHGEF9O43307 516 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 ENTPD3O75355 529 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 BRI3O95415 125 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 PEX11BO96011 259 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 IL1BP01584 269 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 MX1P20591 662 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 PTPN3P26045 913 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 NUP107P57740 925 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 TSC22D1Q15714 1073 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 MOGAT2Q3SYC2 334 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 EPC2Q52LR7 807 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 FAM47AQ5JRC9 791 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 ZNF484Q5JVG2 852 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 PIP5KL1Q5T9C9 394 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 FAM160B1Q5W0V3 765 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 CLEC6AQ6EIG7 209 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 FSTL4Q6MZW2 842 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 MFSD7Q6UXD7 560 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 TMIGD1Q6UXZ0 262 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 NPSR1Q6W5P4 371 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 TRAPPC11Q7Z392 1133 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 HPS6Q86YV9 775 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 SLITRK4Q8IW52 837 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 ADHFE1Q8IWW8 467 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 OR1N1Q8NGS0 311 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 KCNE4Q8WWG9 221 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 SNX19Q92543 992 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 MYDGFQ969H8 173 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 SCLYQ96I15 445 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 SAMD8Q96LT4 415 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 MFFQ9GZY8 342 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 FBXO44Q9H4M3 255 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 NT5MQ9NPB1 228 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 EIF2B3Q9NR50 452 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 GSN-AS1Q9NRJ2 163 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 C19orf12Q9NSK7 152 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 WARS2Q9UGM6 360 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 NOCTQ9UK39 431 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 PLCL2Q9UPR0 1127 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 STARD10Q9Y365 291 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 PCDHGC4Q9Y5F7 938 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 WRNQ14191 1432 aaPredicted RBP eCLIP3.49□□□□□ -1.85
UBR3-208ENST00000474426 HMGXB3Q12766 1538 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 RIMBP3CA6NJZ7 1639 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 RIMBP3BA6NNM3 1639 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 RIMBP3Q9UFD9 1639 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 AKAP12Q02952 1782 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 C2orf74A8MZ97 194 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms