RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 CSNK1DP48730 415 aa18.97■□□□□ 0.63
SORT1-203ENST00000471996 WDR74Q6RFH5 385 aaPredicted RBP18.97■□□□□ 0.63
SORT1-203ENST00000471996 ZNF761Q86XN6 746 aaPredicted RBP18.97■□□□□ 0.63
SORT1-203ENST00000471996 COQ10AQ96MF6 247 aa18.97■□□□□ 0.63
SORT1-203ENST00000471996 PDFQ9HBH1 243 aa18.97■□□□□ 0.63
SORT1-203ENST00000471996 POLHQ9Y253 713 aa18.97■□□□□ 0.63
SORT1-203ENST00000471996 CACNA1DQ01668 2161 aa18.96■□□□□ 0.63
SORT1-203ENST00000471996 A8MX80 341 aa18.96■□□□□ 0.63
SORT1-203ENST00000471996 POLR1CO15160 346 aaPredicted RBP18.96■□□□□ 0.63
SORT1-203ENST00000471996 PDGFAP04085 211 aa18.96■□□□□ 0.63
SORT1-203ENST00000471996 FURINP09958 794 aa18.96■□□□□ 0.63
SORT1-203ENST00000471996 COL8A1P27658 744 aa18.96■□□□□ 0.63
SORT1-203ENST00000471996 ERCC5P28715 1186 aaPredicted RBP18.96■□□□□ 0.63
SORT1-203ENST00000471996 DCTP40126 519 aa18.96■□□□□ 0.63
SORT1-203ENST00000471996 ACTR1BP42025 376 aa18.96■□□□□ 0.63
SORT1-203ENST00000471996 NOP2P46087 812 aaKnown RBP18.96■□□□□ 0.63
SORT1-203ENST00000471996 RGRP47804 291 aa18.96■□□□□ 0.63
SORT1-203ENST00000471996 PPM1FP49593 454 aaPredicted RBP18.96■□□□□ 0.63
SORT1-203ENST00000471996 ACTR1AP61163 376 aa18.96■□□□□ 0.63
SORT1-203ENST00000471996 POLR2LP62875 67 aaKnown RBP18.96■□□□□ 0.63
SORT1-203ENST00000471996 ERV3-1Q14264 604 aa18.96■□□□□ 0.63
SORT1-203ENST00000471996 TAF3Q5VWG9 929 aa18.96■□□□□ 0.63
SORT1-203ENST00000471996 SRLQ86TD4 932 aa18.96■□□□□ 0.63
SORT1-203ENST00000471996 TICAM1Q8IUC6 712 aa18.96■□□□□ 0.63
SORT1-203ENST00000471996 FAM114A1Q8IWE2 563 aa18.96■□□□□ 0.63
SORT1-203ENST00000471996 UMODL1-AS1Q8N2C9 162 aa18.96■□□□□ 0.63
SORT1-203ENST00000471996 GPT2Q8TD30 523 aa18.96■□□□□ 0.63
SORT1-203ENST00000471996 CPA5Q8WXQ8 436 aa18.96■□□□□ 0.63
SORT1-203ENST00000471996 CENPIQ92674 756 aaPredicted RBP18.96■□□□□ 0.63
SORT1-203ENST00000471996 NTAN1Q96AB6 310 aa18.96■□□□□ 0.63
SORT1-203ENST00000471996 NUS1Q96E22 293 aa18.96■□□□□ 0.63
SORT1-203ENST00000471996 SLC38A3Q99624 504 aa18.96■□□□□ 0.63
SORT1-203ENST00000471996 SLC17A4Q9Y2C5 497 aa18.96■□□□□ 0.63
SORT1-203ENST00000471996 C2CD4BA6NLJ0 364 aa18.95■□□□□ 0.62
SORT1-203ENST00000471996 WASH4PA8MWX3 477 aa18.95■□□□□ 0.62
SORT1-203ENST00000471996 IVLP07476 585 aa18.95■□□□□ 0.62
SORT1-203ENST00000471996 DLSTP36957 453 aa18.95■□□□□ 0.62
SORT1-203ENST00000471996 PTPN9P43378 593 aa18.95■□□□□ 0.62
SORT1-203ENST00000471996 POLD2P49005 469 aa18.95■□□□□ 0.62
SORT1-203ENST00000471996 PMS2P54278 862 aa18.95■□□□□ 0.62
SORT1-203ENST00000471996 HDAC4P56524 1084 aa18.95■□□□□ 0.62
SORT1-203ENST00000471996 CDK3Q00526 305 aa18.95■□□□□ 0.62
SORT1-203ENST00000471996 BCL2L1Q07817 233 aa18.95■□□□□ 0.62
SORT1-203ENST00000471996 MAMDC2Q7Z304 686 aaPredicted RBP18.95■□□□□ 0.62
SORT1-203ENST00000471996 CREBRFQ8IUR6 639 aa18.95■□□□□ 0.62
SORT1-203ENST00000471996 ELOA2Q8IYF1 753 aaPredicted RBP18.95■□□□□ 0.62
SORT1-203ENST00000471996 PYROXD2Q8N2H3 581 aa18.95■□□□□ 0.62
SORT1-203ENST00000471996 KCTD5Q9NXV2 234 aa18.95■□□□□ 0.62
SORT1-203ENST00000471996 SRPK3Q9UPE1 567 aa18.95■□□□□ 0.62
SORT1-203ENST00000471996 PLEKHM1Q9Y4G2 1056 aa18.95■□□□□ 0.62
SORT1-203ENST00000471996 MAP4K5Q9Y4K4 846 aa18.95■□□□□ 0.62
SORT1-203ENST00000471996 GOLGA6L4A6NEF3 574 aa18.94■□□□□ 0.62
SORT1-203ENST00000471996 J3KR12 359 aa18.94■□□□□ 0.62
SORT1-203ENST00000471996 NOMO3P69849 1222 aa18.94■□□□□ 0.62
SORT1-203ENST00000471996 NAA35Q5VZE5 725 aa18.94■□□□□ 0.62
SORT1-203ENST00000471996 SLFN11Q7Z7L1 901 aa18.94■□□□□ 0.62
SORT1-203ENST00000471996 PAF1Q8N7H5 531 aa18.94■□□□□ 0.62
SORT1-203ENST00000471996 TSEN2Q8NCE0 465 aaKnown RBP18.94■□□□□ 0.62
SORT1-203ENST00000471996 SLC37A2Q8TED4 501 aa18.94■□□□□ 0.62
SORT1-203ENST00000471996 FAM172AQ8WUF8 416 aa18.94■□□□□ 0.62
SORT1-203ENST00000471996 CROTQ9UKG9 612 aa18.94■□□□□ 0.62
SORT1-203ENST00000471996 TRBV23OR9-2A0A075B6M9 112 aa18.93■□□□□ 0.62
SORT1-203ENST00000471996 PRAMEF11O60813 436 aa18.93■□□□□ 0.62
SORT1-203ENST00000471996 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.93■□□□□ 0.62
SORT1-203ENST00000471996 TMEM135Q86UB9 458 aa18.93■□□□□ 0.62
SORT1-203ENST00000471996 SFRP1Q8N474 314 aa18.93■□□□□ 0.62
SORT1-203ENST00000471996 JOSD2Q8TAC2 188 aa18.93■□□□□ 0.62
SORT1-203ENST00000471996 NCSTNQ92542 709 aa18.93■□□□□ 0.62
SORT1-203ENST00000471996 SCARF2Q96GP6 870 aaPredicted RBP18.93■□□□□ 0.62
SORT1-203ENST00000471996 LRRC19Q9H756 370 aa18.93■□□□□ 0.62
SORT1-203ENST00000471996 CATSPERBQ9H7T0 1116 aa18.93■□□□□ 0.62
SORT1-203ENST00000471996 B4GALT6Q9UBX8 382 aa18.93■□□□□ 0.62
SORT1-203ENST00000471996 CSMD1Q96PZ7 3565 aa18.92■□□□□ 0.62
SORT1-203ENST00000471996 RP1L1Q8IWN7 2480 aaPredicted RBP18.92■□□□□ 0.62
SORT1-203ENST00000471996 TRAFD1O14545 582 aaPredicted RBP18.92■□□□□ 0.62
SORT1-203ENST00000471996 INPP4BO15327 924 aa18.92■□□□□ 0.62
SORT1-203ENST00000471996 TEAD1P28347 426 aa18.92■□□□□ 0.62
SORT1-203ENST00000471996 CNGA3Q16281 694 aa18.92■□□□□ 0.62
SORT1-203ENST00000471996 NOP9Q86U38 636 aaKnown RBP18.92■□□□□ 0.62
SORT1-203ENST00000471996 APLFQ8IW19 511 aaPredicted RBP18.92■□□□□ 0.62
SORT1-203ENST00000471996 OR2M4Q96R27 311 aa18.92■□□□□ 0.62
SORT1-203ENST00000471996 ULBP3Q9BZM4 244 aa18.92■□□□□ 0.62
SORT1-203ENST00000471996 CASS4Q9NQ75 786 aa18.92■□□□□ 0.62
SORT1-203ENST00000471996 OAS3Q9Y6K5 1087 aaKnown RBP18.92■□□□□ 0.62
SORT1-203ENST00000471996 CENPEQ02224 2701 aa18.91■□□□□ 0.62
SORT1-203ENST00000471996 CDC14CA4D256 554 aa18.91■□□□□ 0.62
SORT1-203ENST00000471996 BIN1O00499 593 aa18.91■□□□□ 0.62
SORT1-203ENST00000471996 CREB3O43889 395 aa18.91■□□□□ 0.62
SORT1-203ENST00000471996 CLDN1O95832 211 aa18.91■□□□□ 0.62
SORT1-203ENST00000471996 MMEP08473 750 aa18.91■□□□□ 0.62
SORT1-203ENST00000471996 POU3F2P20265 443 aaPredicted RBP18.91■□□□□ 0.62
SORT1-203ENST00000471996 TNFRSF8P28908 595 aa18.91■□□□□ 0.62
SORT1-203ENST00000471996 NSUN2Q08J23 767 aaKnown RBP eCLIP18.91■□□□□ 0.62
SORT1-203ENST00000471996 EIF2S3LQ2VIR3 472 aaKnown RBP18.91■□□□□ 0.62
SORT1-203ENST00000471996 DPY19L2P1Q6NXN4 242 aa18.91■□□□□ 0.62
SORT1-203ENST00000471996 C6orf15Q6UXA7 325 aaPredicted RBP18.91■□□□□ 0.62
SORT1-203ENST00000471996 CBARPQ8N350 705 aaPredicted RBP18.91■□□□□ 0.62
SORT1-203ENST00000471996 DTD2Q96FN9 168 aa18.91■□□□□ 0.62
SORT1-203ENST00000471996 SIDT1Q9NXL6 827 aaKnown RBP18.91■□□□□ 0.62
SORT1-203ENST00000471996 KCND3Q9UK17 655 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms