RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 NUMA1Q14980 2115 aa19.17■□□□□ 0.66
PSPC1-203ENST00000471658 IGLON5A6NGN9 336 aa19.17■□□□□ 0.66
PSPC1-203ENST00000471658 OR51F1A6NGY5 319 aa19.17■□□□□ 0.66
PSPC1-203ENST00000471658 VAPBO95292 243 aa19.17■□□□□ 0.66
PSPC1-203ENST00000471658 C6P13671 934 aa19.17■□□□□ 0.66
PSPC1-203ENST00000471658 ZNF30P17039 623 aa19.17■□□□□ 0.66
PSPC1-203ENST00000471658 ARNTP27540 789 aa19.17■□□□□ 0.66
PSPC1-203ENST00000471658 ACVR1Q04771 509 aa19.17■□□□□ 0.66
PSPC1-203ENST00000471658 CCDC15Q0P6D6 951 aa19.17■□□□□ 0.66
PSPC1-203ENST00000471658 LAMB3Q13751 1172 aa19.17■□□□□ 0.66
PSPC1-203ENST00000471658 SLC29A2Q14542 456 aa19.17■□□□□ 0.66
PSPC1-203ENST00000471658 ACOX1Q15067 660 aa19.17■□□□□ 0.66
PSPC1-203ENST00000471658 SKIDA1Q1XH10 827 aa19.17■□□□□ 0.66
PSPC1-203ENST00000471658 SEL1L3Q68CR1 1132 aa19.17■□□□□ 0.66
PSPC1-203ENST00000471658 MAMSTRQ6ZN01 415 aa19.17■□□□□ 0.66
PSPC1-203ENST00000471658 NLRP9Q7RTR0 991 aa19.17■□□□□ 0.66
PSPC1-203ENST00000471658 CAMKK1Q8N5S9 505 aa19.17■□□□□ 0.66
PSPC1-203ENST00000471658 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.17■□□□□ 0.66
PSPC1-203ENST00000471658 GPR26Q8NDV2 337 aa19.17■□□□□ 0.66
PSPC1-203ENST00000471658 KLK6Q92876 244 aa19.17■□□□□ 0.66
PSPC1-203ENST00000471658 PKP3Q9Y446 797 aa19.17■□□□□ 0.66
PSPC1-203ENST00000471658 TBC1D3DA0A087WVF3 549 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 TBC1D3IA0A087WXS9 549 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 TBC1D3EA0A087X179 549 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 TBC1D3KA0A087X1G2 549 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 CCDC162PA2VCL2 907 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 TBC1D3FA6NER0 549 aaPredicted RBP19.16■□□□□ 0.66
PSPC1-203ENST00000471658 TBC1D3LB9A6J9 549 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 SLC7A4O43246 635 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 TSPAN6O43657 245 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 TBC1D3HP0C7X1 549 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 PRSS56P0CW18 603 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 PSMA3P25788 255 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 ARCN1P48444 511 aaKnown RBP19.16■□□□□ 0.66
PSPC1-203ENST00000471658 SPINT3P49223 89 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 ALS2CLQ60I27 953 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 TBC1D3GQ6DHY5 549 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 TBC1D3CQ6IPX1 549 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 TECPR1Q7Z6L1 1165 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 TBC1D3Q8IZP1 549 aaPredicted RBP19.16■□□□□ 0.66
PSPC1-203ENST00000471658 GSDMBQ8TAX9 411 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 FBF1Q8TES7 1133 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 COQ10AQ96MF6 247 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 TTC25Q96NG3 672 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 BTBD1Q9H0C5 482 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 SMYD2Q9NRG4 433 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 RIMKLBQ9ULI2 386 aa19.16■□□□□ 0.66
PSPC1-203ENST00000471658 TCRBV9S1A1TA0A576 114 aa19.15■□□□□ 0.66
PSPC1-203ENST00000471658 H0Y858 1186 aa19.15■□□□□ 0.66
PSPC1-203ENST00000471658 RNGTTO60942 597 aaKnown RBP19.15■□□□□ 0.66
PSPC1-203ENST00000471658 RPP40O75818 363 aaKnown RBP19.15■□□□□ 0.66
PSPC1-203ENST00000471658 F7P08709 466 aaPredicted RBP19.15■□□□□ 0.66
PSPC1-203ENST00000471658 ERVK-10P10266 1014 aa19.15■□□□□ 0.66
PSPC1-203ENST00000471658 CA5AP35218 305 aa19.15■□□□□ 0.66
PSPC1-203ENST00000471658 PPP2CBP62714 309 aa19.15■□□□□ 0.66
PSPC1-203ENST00000471658 PPP2CAP67775 309 aa19.15■□□□□ 0.66
PSPC1-203ENST00000471658 XIAPP98170 497 aa19.15■□□□□ 0.66
PSPC1-203ENST00000471658 PDE1BQ01064 536 aa19.15■□□□□ 0.66
PSPC1-203ENST00000471658 SFSWAPQ12872 951 aaKnown RBP19.15■□□□□ 0.66
PSPC1-203ENST00000471658 PEX6Q13608 980 aa19.15■□□□□ 0.66
PSPC1-203ENST00000471658 MREGQ8N565 214 aa19.15■□□□□ 0.66
PSPC1-203ENST00000471658 OR6P1Q8NGX9 317 aa19.15■□□□□ 0.66
PSPC1-203ENST00000471658 SCAMP4Q969E2 229 aa19.15■□□□□ 0.66
PSPC1-203ENST00000471658 ZBTB9Q96C00 473 aa19.15■□□□□ 0.66
PSPC1-203ENST00000471658 TOE1Q96GM8 510 aaKnown RBP19.15■□□□□ 0.66
PSPC1-203ENST00000471658 ARFGAP3Q9NP61 516 aa19.15■□□□□ 0.66
PSPC1-203ENST00000471658 IL26Q9NPH9 171 aa19.15■□□□□ 0.66
PSPC1-203ENST00000471658 C20orf96Q9NUD7 363 aaPredicted RBP19.15■□□□□ 0.66
PSPC1-203ENST00000471658 ARGLU1Q9NWB6 273 aaPredicted RBP19.15■□□□□ 0.66
PSPC1-203ENST00000471658 MOCS1Q9NZB8 636 aa19.15■□□□□ 0.66
PSPC1-203ENST00000471658 SLC17A6Q9P2U8 582 aa19.15■□□□□ 0.66
PSPC1-203ENST00000471658 A0A1W2PQU0 124 aa19.14■□□□□ 0.66
PSPC1-203ENST00000471658 FAM86C2PA6NEL3 165 aa19.14■□□□□ 0.66
PSPC1-203ENST00000471658 GAPDHSO14556 408 aaPredicted RBP19.14■□□□□ 0.66
PSPC1-203ENST00000471658 GPR39O43194 453 aa19.14■□□□□ 0.66
PSPC1-203ENST00000471658 LZTS3O60299 673 aaPredicted RBP19.14■□□□□ 0.66
PSPC1-203ENST00000471658 RECQL5O94762 991 aaPredicted RBP19.14■□□□□ 0.66
PSPC1-203ENST00000471658 GOT2P00505 430 aaKnown RBP19.14■□□□□ 0.66
PSPC1-203ENST00000471658 IGLV3-19P01714 112 aa19.14■□□□□ 0.66
PSPC1-203ENST00000471658 FGL2Q14314 439 aa19.14■□□□□ 0.66
PSPC1-203ENST00000471658 LONRF1Q17RB8 773 aa19.14■□□□□ 0.66
PSPC1-203ENST00000471658 ARMC3Q5W041 872 aa19.14■□□□□ 0.66
PSPC1-203ENST00000471658 KIAA0930Q6ICG6 404 aaPredicted RBP19.14■□□□□ 0.66
PSPC1-203ENST00000471658 FAM151BQ6UXP7 276 aa19.14■□□□□ 0.66
PSPC1-203ENST00000471658 PTAR1Q7Z6K3 402 aaPredicted RBP19.14■□□□□ 0.66
PSPC1-203ENST00000471658 MAML2Q8IZL2 1156 aaPredicted RBP19.14■□□□□ 0.66
PSPC1-203ENST00000471658 FAM96AQ9H5X1 160 aa19.14■□□□□ 0.66
PSPC1-203ENST00000471658 PKD2L2Q9NZM6 624 aa19.14■□□□□ 0.66
PSPC1-203ENST00000471658 RABGEF1Q9UJ41 708 aa19.14■□□□□ 0.66
PSPC1-203ENST00000471658 BPTFQ12830 3046 aa19.14■□□□□ 0.65
PSPC1-203ENST00000471658 IGHV1OR15-9A0A0B4J2B8 117 aa19.14■□□□□ 0.65
PSPC1-203ENST00000471658 CXorf49A8MYA2 514 aaPredicted RBP19.14■□□□□ 0.65
PSPC1-203ENST00000471658 PSMD11O00231 422 aa19.14■□□□□ 0.65
PSPC1-203ENST00000471658 C1QAP02745 245 aa19.14■□□□□ 0.65
PSPC1-203ENST00000471658 SHBGP04278 402 aa19.14■□□□□ 0.65
PSPC1-203ENST00000471658 TSHRP16473 764 aa19.14■□□□□ 0.65
PSPC1-203ENST00000471658 MAT2AP31153 395 aaKnown RBP19.14■□□□□ 0.65
PSPC1-203ENST00000471658 CDKN1CP49918 316 aaPredicted RBP19.14■□□□□ 0.65
PSPC1-203ENST00000471658 PRAMEP78395 509 aa19.14■□□□□ 0.65
PSPC1-203ENST00000471658 EFTUD2Q15029 972 aaKnown RBP eCLIP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms