RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 SRLQ86TD4 932 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 APCDD1Q8J025 514 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 TERB1Q8NA31 727 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 OR13J1Q8NGT2 312 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 BLOC1S5Q8TDH9 187 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 EXOC2Q96KP1 924 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 ANKRD6Q9Y2G4 727 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.5■□□□□ 0.39
HSPG2-208ENST00000471322 C2orf81A6NN90 581 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 SATB1Q01826 763 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 DMC1Q14565 340 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 TAF1AQ15573 450 aaPredicted RBP17.5■□□□□ 0.39
HSPG2-208ENST00000471322 GEN1Q17RS7 908 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 CCDC153Q494R4 210 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 ZNF470Q6ECI4 717 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 SPATA21Q7Z572 469 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 ARMC2Q8NEN0 867 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 SCG3Q8WXD2 468 aaKnown RBP17.5■□□□□ 0.39
HSPG2-208ENST00000471322 LMLNQ96KR4 655 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 HACD3Q9P035 362 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 TLK1Q9UKI8 766 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 WDR91A4D1P6 747 aa17.49■□□□□ 0.39
HSPG2-208ENST00000471322 LAMTOR5O43504 91 aa17.49■□□□□ 0.39
HSPG2-208ENST00000471322 EDF1O60869 148 aaKnown RBP17.49■□□□□ 0.39
HSPG2-208ENST00000471322 RPP40O75818 363 aaKnown RBP17.49■□□□□ 0.39
HSPG2-208ENST00000471322 COL6A2P12110 1019 aa17.49■□□□□ 0.39
HSPG2-208ENST00000471322 CRABP2P29373 138 aa17.49■□□□□ 0.39
HSPG2-208ENST00000471322 RPL26P61254 145 aaKnown RBP17.49■□□□□ 0.39
HSPG2-208ENST00000471322 TCF15Q12870 199 aa17.49■□□□□ 0.39
HSPG2-208ENST00000471322 CTBP1Q13363 440 aa17.49■□□□□ 0.39
HSPG2-208ENST00000471322 USP10Q14694 798 aaKnown RBP17.49■□□□□ 0.39
HSPG2-208ENST00000471322 ZKSCAN8Q15776 578 aaPredicted RBP17.49■□□□□ 0.39
HSPG2-208ENST00000471322 ATG16L1Q676U5 607 aa17.49■□□□□ 0.39
HSPG2-208ENST00000471322 MAML2Q8IZL2 1156 aaPredicted RBP17.49■□□□□ 0.39
HSPG2-208ENST00000471322 OR6P1Q8NGX9 317 aa17.49■□□□□ 0.39
HSPG2-208ENST00000471322 HDAC10Q969S8 669 aa17.49■□□□□ 0.39
HSPG2-208ENST00000471322 C12orf65Q9H3J6 166 aaKnown RBP17.49■□□□□ 0.39
HSPG2-208ENST00000471322 FBXO10Q9UK96 956 aa17.49■□□□□ 0.39
HSPG2-208ENST00000471322 SLC39A10Q9ULF5 831 aa17.49■□□□□ 0.39
HSPG2-208ENST00000471322 PHTF1Q9UMS5 762 aa17.49■□□□□ 0.39
HSPG2-208ENST00000471322 RPL26L1Q9UNX3 145 aaKnown RBP17.49■□□□□ 0.39
HSPG2-208ENST00000471322 FCF1Q9Y324 198 aaKnown RBP17.49■□□□□ 0.39
HSPG2-208ENST00000471322 ATXN2Q99700 1313 aaKnown RBP17.49■□□□□ 0.39
HSPG2-208ENST00000471322 A0A096LPK6 155 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 ANKRD66B4E2M5 251 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 PRLP01236 227 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 IL1BP01584 269 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 PSMA3P25788 255 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 GABRB3P28472 473 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 HLA-FP30511 346 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 CD70P32970 193 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 WASP42768 502 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 SLC1A2P43004 574 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 LEPRP48357 1165 aaKnown RBP17.48■□□□□ 0.39
HSPG2-208ENST00000471322 POU4F1Q01851 419 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 CSTF1Q05048 431 aaKnown RBP17.48■□□□□ 0.39
HSPG2-208ENST00000471322 SULT2A1Q06520 285 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 GRM3Q14832 879 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 FBXO43Q4G163 708 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 TAF1BQ53T94 588 aaPredicted RBP17.48■□□□□ 0.39
HSPG2-208ENST00000471322 PITRM1Q5JRX3 1037 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 N4BP2L1Q5TBK1 243 aaPredicted RBP17.48■□□□□ 0.39
HSPG2-208ENST00000471322 MRNIPQ6NTE8 343 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 C6orf89Q6UWU4 347 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 YTHDF3Q7Z739 585 aaKnown RBP17.48■□□□□ 0.39
HSPG2-208ENST00000471322 NUDCD3Q8IVD9 361 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 DENND6AQ8IWF6 608 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 GPR150Q8NGU9 434 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 SORCS1Q8WY21 1168 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 ISG20Q96AZ6 181 aaKnown RBP17.48■□□□□ 0.39
HSPG2-208ENST00000471322 ATXN7L3BQ96GX2 97 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 TSNARE1Q96NA8 513 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 SLC2A11Q9BYW1 496 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 GGT7Q9UJ14 662 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 HCN2Q9UL51 889 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 ARL2BPQ9Y2Y0 163 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 PCDHGC4Q9Y5F7 938 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 KIAA1549LQ6ZVL6 1849 aa17.48■□□□□ 0.39
HSPG2-208ENST00000471322 KIAA0754O94854 1291 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 MT-CO1P00395 513 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 C2P06681 752 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 APOA4P06727 396 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 BPGMP07738 259 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 MPP1Q00013 466 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 PPM1JQ5JR12 505 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 FAM47EQ6ZV65 393 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 CCDC91Q7Z6B0 441 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 SDCCAG8Q86SQ7 713 aaPredicted RBP17.47■□□□□ 0.39
HSPG2-208ENST00000471322 CILP2Q8IUL8 1156 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 SYNPOQ8N3V7 929 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 SPEM1Q8N4L4 309 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 OTUD6BQ8N6M0 293 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 CCDC63Q8NA47 563 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 LPCAT1Q8NF37 534 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 NSMCE3Q96MG7 304 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 CIPCQ9C0C6 399 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 FAM86C1Q9NVL1 165 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 NLE1Q9NVX2 485 aaPredicted RBP17.47■□□□□ 0.39
HSPG2-208ENST00000471322 SIRPGQ9P1W8 387 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 ARL5AQ9Y689 179 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms