RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 SHOC2Q9UQ13 582 aa19.73■□□□□ 0.75
HDAC7-220ENST00000471235 AAR2Q9Y312 384 aaKnown RBP19.73■□□□□ 0.75
HDAC7-220ENST00000471235 OR1A2Q9Y585 309 aa19.73■□□□□ 0.75
HDAC7-220ENST00000471235 PCDHGB2Q9Y5G2 931 aa19.73■□□□□ 0.75
HDAC7-220ENST00000471235 CES2O00748 559 aa19.72■□□□□ 0.75
HDAC7-220ENST00000471235 YKT6O15498 198 aa19.72■□□□□ 0.75
HDAC7-220ENST00000471235 AGTP01019 485 aa19.72■□□□□ 0.75
HDAC7-220ENST00000471235 IFNB1P01574 187 aa19.72■□□□□ 0.75
HDAC7-220ENST00000471235 SLC4A1P02730 911 aa19.72■□□□□ 0.75
HDAC7-220ENST00000471235 STIP1P31948 543 aaKnown RBP19.72■□□□□ 0.75
HDAC7-220ENST00000471235 ID4P47928 161 aa19.72■□□□□ 0.75
HDAC7-220ENST00000471235 RXRGP48443 463 aa19.72■□□□□ 0.75
HDAC7-220ENST00000471235 ARRB1P49407 418 aaPredicted RBP19.72■□□□□ 0.75
HDAC7-220ENST00000471235 THOP1P52888 689 aa19.72■□□□□ 0.75
HDAC7-220ENST00000471235 PUM1Q14671 1186 aaKnown RBP eCLIP19.72■□□□□ 0.75
HDAC7-220ENST00000471235 NFATC4Q14934 902 aa19.72■□□□□ 0.75
HDAC7-220ENST00000471235 PARP6Q2NL67 630 aa19.72■□□□□ 0.75
HDAC7-220ENST00000471235 PNCKQ6P2M8 343 aa19.72■□□□□ 0.75
HDAC7-220ENST00000471235 ZNF765Q7L2R6 523 aa19.72■□□□□ 0.75
HDAC7-220ENST00000471235 PRUNE1Q86TP1 453 aa19.72■□□□□ 0.75
HDAC7-220ENST00000471235 PARGQ86W56 976 aa19.72■□□□□ 0.75
HDAC7-220ENST00000471235 TAB3Q8N5C8 712 aaPredicted RBP19.72■□□□□ 0.75
HDAC7-220ENST00000471235 GLIS1Q8NBF1 620 aa19.72■□□□□ 0.75
HDAC7-220ENST00000471235 EID2BQ96D98 161 aa19.72■□□□□ 0.75
HDAC7-220ENST00000471235 APOL2Q9BQE5 337 aa19.72■□□□□ 0.75
HDAC7-220ENST00000471235 DCHS1Q96JQ0 3298 aa19.72■□□□□ 0.75
HDAC7-220ENST00000471235 DNAH14Q0VDD8 3507 aa19.72■□□□□ 0.75
HDAC7-220ENST00000471235 ZNF185O15231 689 aa19.71■□□□□ 0.75
HDAC7-220ENST00000471235 FANCGO15287 622 aa19.71■□□□□ 0.75
HDAC7-220ENST00000471235 PCDHGA12O60330 932 aa19.71■□□□□ 0.75
HDAC7-220ENST00000471235 SOD1P00441 154 aa19.71■□□□□ 0.75
HDAC7-220ENST00000471235 ETS1P14921 441 aa19.71■□□□□ 0.75
HDAC7-220ENST00000471235 TSHRP16473 764 aa19.71■□□□□ 0.75
HDAC7-220ENST00000471235 SPINT3P49223 89 aa19.71■□□□□ 0.75
HDAC7-220ENST00000471235 KIAA1024LP59773 190 aa19.71■□□□□ 0.75
HDAC7-220ENST00000471235 DPTQ07507 201 aa19.71■□□□□ 0.75
HDAC7-220ENST00000471235 EIF2B5Q13144 721 aaKnown RBP19.71■□□□□ 0.75
HDAC7-220ENST00000471235 PTK2BQ14289 1009 aa19.71■□□□□ 0.75
HDAC7-220ENST00000471235 KCTD11Q693B1 232 aa19.71■□□□□ 0.75
HDAC7-220ENST00000471235 RAET1GQ6H3X3 334 aa19.71■□□□□ 0.75
HDAC7-220ENST00000471235 PIP4P1Q86T03 277 aa19.71■□□□□ 0.75
HDAC7-220ENST00000471235 NAXDQ8IW45 347 aa19.71■□□□□ 0.75
HDAC7-220ENST00000471235 RAVER1Q8IY67 606 aaKnown RBP19.71■□□□□ 0.75
HDAC7-220ENST00000471235 NRSN1Q8IZ57 195 aa19.71■□□□□ 0.75
HDAC7-220ENST00000471235 CCHCR1Q8TD31 782 aa19.71■□□□□ 0.75
HDAC7-220ENST00000471235 ACTRT1Q8TDG2 376 aa19.71■□□□□ 0.75
HDAC7-220ENST00000471235 FUBP1Q96AE4 644 aaKnown RBP19.71■□□□□ 0.75
HDAC7-220ENST00000471235 NAPGQ99747 312 aaPredicted RBP19.71■□□□□ 0.75
HDAC7-220ENST00000471235 TBL1YQ9BQ87 522 aa19.71■□□□□ 0.75
HDAC7-220ENST00000471235 ZFYVE1Q9HBF4 777 aa19.71■□□□□ 0.75
HDAC7-220ENST00000471235 HOMER3Q9NSC5 361 aa19.71■□□□□ 0.75
HDAC7-220ENST00000471235 PKD2L2Q9NZM6 624 aa19.71■□□□□ 0.75
HDAC7-220ENST00000471235 PNMA8BQ9ULN7 279 aaPredicted RBP19.71■□□□□ 0.75
HDAC7-220ENST00000471235 DRG1Q9Y295 367 aaKnown RBP19.71■□□□□ 0.75
HDAC7-220ENST00000471235 CNOT1A5YKK6 2376 aaKnown RBP19.7■□□□□ 0.74
HDAC7-220ENST00000471235 GOLGA6CA6NDK9 693 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 GOLGA6BA6NDN3 693 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 AURKAO14965 403 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 SDC3O75056 442 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 GOLGA6DP0CG33 693 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 TCP1P17987 556 aaKnown RBP19.7■□□□□ 0.74
HDAC7-220ENST00000471235 TEAD1P28347 426 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 TRIM23P36406 574 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 KCNJ1P48048 391 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 SPARCL1Q14515 664 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 ZNF542PQ5EBM4 170 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 RANBP10Q6VN20 620 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 KANSL1Q7Z3B3 1105 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 TMC3Q7Z5M5 1100 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 HEATR4Q86WZ0 1026 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 GATAD2AQ86YP4 633 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 TTC30BQ8N4P2 665 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 CCDC89Q8N998 374 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 SAP25Q8TEE9 199 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 SCAMP4Q969E2 229 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 AP2M1Q96CW1 435 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 SRPK1Q96SB4 655 aaKnown RBP19.7■□□□□ 0.74
HDAC7-220ENST00000471235 NAP1L3Q99457 506 aaPredicted RBP19.7■□□□□ 0.74
HDAC7-220ENST00000471235 AP1M1Q9BXS5 423 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 GPR63Q9BZJ6 419 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 WDR26Q9H7D7 661 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 DNAJC28Q9NX36 388 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 GOLGA6AQ9NYA3 693 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 BTBD3Q9Y2F9 522 aa19.7■□□□□ 0.74
HDAC7-220ENST00000471235 DCDC2BA2VCK2 349 aa19.69■□□□□ 0.74
HDAC7-220ENST00000471235 FLRT2O43155 660 aa19.69■□□□□ 0.74
HDAC7-220ENST00000471235 SH3BP5O60239 455 aa19.69■□□□□ 0.74
HDAC7-220ENST00000471235 USP12O75317 370 aa19.69■□□□□ 0.74
HDAC7-220ENST00000471235 ZSCAN5DPP0CG00 497 aa19.69■□□□□ 0.74
HDAC7-220ENST00000471235 NME1P15531 152 aaKnown RBP19.69■□□□□ 0.74
HDAC7-220ENST00000471235 BNIP3Q12983 259 aa19.69■□□□□ 0.74
HDAC7-220ENST00000471235 PAPD7Q5XG87 772 aaKnown RBP19.69■□□□□ 0.74
HDAC7-220ENST00000471235 TTC27Q6P3X3 843 aa19.69■□□□□ 0.74
HDAC7-220ENST00000471235 DBX2Q6ZNG2 339 aa19.69■□□□□ 0.74
HDAC7-220ENST00000471235 NYAP1Q6ZVC0 841 aa19.69■□□□□ 0.74
HDAC7-220ENST00000471235 DEFB124Q8NES8 71 aa19.69■□□□□ 0.74
HDAC7-220ENST00000471235 BLOC1S5Q8TDH9 187 aa19.69■□□□□ 0.74
HDAC7-220ENST00000471235 WDR92Q96MX6 357 aa19.69■□□□□ 0.74
HDAC7-220ENST00000471235 AGAP2Q99490 1192 aa19.69■□□□□ 0.74
HDAC7-220ENST00000471235 RIOK2Q9BVS4 552 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms