RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 RPS5P46782 204 aaKnown RBP9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 SEPHS1P49903 392 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 CSRP3P50461 194 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 ST13P50502 369 aaKnown RBP9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 DNAJB13P59910 316 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 ACTR2P61160 394 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 B2MP61769 119 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 TRAF3Q13114 568 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 STARD3Q14849 445 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 ANO4Q32M45 955 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 PTPN20Q4JDL3 420 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 FSTL4Q6MZW2 842 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 TRAF7Q6Q0C0 670 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 CYP20A1Q6UW02 462 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 HDDC2Q7Z4H3 204 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 FBXL6Q8N531 539 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 WDTC1Q8N5D0 677 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 BLOC1S5Q8TDH9 187 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 BPIFB1Q8TDL5 484 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 ARNTL2Q8WYA1 636 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 MFSD3Q96ES6 412 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 GMCL1Q96IK5 515 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 QKIQ96PU8 341 aaKnown RBP eCLIP9.02□□□□□ -0.962e-13■■■■■ 29.8
SMARCE1-207ENST00000469334 CCDC32Q9BV29 185 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 TARS2Q9BW92 718 aaKnown RBP9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 TEX13BQ9BXU2 312 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 TRIM54Q9BYV2 358 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 NXF2Q9GZY0 626 aaKnown RBP9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 TASP1Q9H6P5 420 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 ACAD9Q9H845 621 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 RAVER2Q9HCJ3 691 aaKnown RBP9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 WDR6Q9NNW5 1121 aaKnown RBP9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 ANKEF1Q9NU02 776 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 TOR4AQ9NXH8 423 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 ATPIF1Q9UII2 106 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 VPS4AQ9UN37 437 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 ENPP3O14638 875 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 PPEF1O14829 653 aaPredicted RBP9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 ARHGEF9O43307 516 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 MED7O43513 233 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 NOS1APO75052 506 aaPredicted RBP9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 TULP3O75386 442 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 CNTN5O94779 1100 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 PRKD3O94806 890 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 STMN1P16949 149 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 ITGA2P17301 1181 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 CES1P23141 567 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 YWHABP31946 246 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 CD68P34810 354 aaPredicted RBP9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 ETV6P41212 452 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 CRKLP46109 303 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 NR2C2P49116 596 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 KPNA2P52292 529 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 VBP1P61758 197 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 IRF9Q00978 393 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 INCA1Q0VD86 236 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 PRPSAP1Q14558 356 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 MFSD10Q14728 455 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 COLEC12Q5KU26 742 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 FAM102BQ5T8I3 360 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 NIPA1Q7RTP0 329 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 STRA8Q7Z7C7 330 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 GALNT7Q86SF2 657 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 PLCZ1Q86YW0 608 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 C4orf19Q8IY42 314 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 TCAIMQ8N3R3 496 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 CELF2-AS1Q8N7Q2 184 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 GMCL1P1Q8NEA9 526 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 PJA1Q8NG27 643 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 AKT1S1Q96B36 256 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 TMCO6Q96DC7 493 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 ZHX1-C8orf76Q96EF9 292 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 FAM84AQ96KN4 292 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 PEBP4Q96S96 227 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 SLC30A3Q99726 388 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 ZNF670Q9BS34 389 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 TRAF4Q9BUZ4 470 aaPredicted RBP9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 KIFC1Q9BW19 673 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 MRPL9Q9BYD2 267 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 DHX35Q9H5Z1 703 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 NARFLQ9H6Q4 476 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 EML4Q9HC35 981 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 CHRAC1Q9NRG0 131 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 FAM118AQ9NWS6 357 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 NSMCE4AQ9NXX6 385 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 USE1Q9NZ43 259 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 CCDC59Q9P031 241 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 OPTCQ9UBM4 332 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 HMGXB4Q9UGU5 601 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 RAPGEFL1Q9UHV5 662 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 TLK1Q9UKI8 766 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 INTS6Q9UL03 887 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 POLHQ9Y253 713 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 PCDHB3Q9Y5E6 796 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 WDR81Q562E7 1941 aa9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 COL5A3P25940 1745 aaPredicted RBP9.02□□□□□ -0.97
SMARCE1-207ENST00000469334 A0A0G2JMP0 313 aa9.01□□□□□ -0.97
SMARCE1-207ENST00000469334 H3BMM5 538 aa9.01□□□□□ -0.97
SMARCE1-207ENST00000469334 TK2O00142 265 aa9.01□□□□□ -0.97
SMARCE1-207ENST00000469334 CTDSP2O14595 271 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms