RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 CDK3Q00526 305 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 PTSQ03393 145 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 DPTQ07507 201 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 CCDC173Q0VFZ6 552 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 AP1B1Q10567 949 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 ILF3Q12906 894 aaKnown RBP eCLIP7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 SLC10A2Q12908 348 aaPredicted RBP7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 C3orf38Q5JPI3 329 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 LRRC38Q5VT99 294 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 LRRC66Q68CR7 880 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 ALG1LQ6GMV1 187 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 FOXR1Q6PIV2 292 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 OGFOD3Q6PK18 319 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 TECPR1Q7Z6L1 1165 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 VSIG1Q86XK7 387 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 RHOT1Q8IXI2 618 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 Q8N9G6 341 aaPredicted RBP7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 KYQ8NBH2 561 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 LPCAT1Q8NF37 534 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 GPR156Q8NFN8 814 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 CCL4L1Q8NHW4 92 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 SNIP1Q8TAD8 396 aaKnown RBP7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 ARRDC2Q8TBH0 407 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 CCDC74AQ96AQ1 378 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 RNF25Q96BH1 459 aaPredicted RBP7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 AP2M1Q96CW1 435 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 HDAC11Q96DB2 347 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 ATXN7L3BQ96GX2 97 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 GFM1Q96RP9 751 aaKnown RBP7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 TDRD1Q9BXT4 1180 aaKnown RBP7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 SUDS3Q9H7L9 328 aaPredicted RBP7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 CARS2Q9HA77 564 aaKnown RBP7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 PCDH9Q9HC56 1237 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 DDX56Q9NY93 547 aaKnown RBP7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 DTLQ9NZJ0 730 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 CD84Q9UIB8 345 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 DNPEPQ9ULA0 475 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 INTUQ9ULD6 942 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 RPL26L1Q9UNX3 145 aaKnown RBP7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 SATB2Q9UPW6 733 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 ENTPD2Q9Y5L3 495 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 RP1P56715 2156 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 CACNA1GO43497 2377 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 ADAMTS20P59510 1910 aa7.17□□□□□ -1.26
SNRPD3-205ENST00000468770 C3orf70A6NLC5 250 aaPredicted RBP7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 ZNF487B1APH4 448 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 B4DGG1 531 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 TMX2-CTNND1H3BSU7 103 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 NTN3O00634 580 aaPredicted RBP7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 PPP1R12AO14974 1030 aaPredicted RBP7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 CASC3O15234 703 aaKnown RBP7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 SPOPO43791 374 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 DXOO77932 396 aaKnown RBP7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 MTA2O94776 668 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 CLDN7O95471 211 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 PRLP01236 227 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 FUCA1P04066 466 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 KRT1P04264 644 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 RPLP0P05388 317 aaKnown RBP7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 HLA-DQB2P05538 268 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 PYGLP06737 847 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 PNLIPP16233 465 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 COMTP21964 271 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 TEAD1P28347 426 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 CD86P42081 329 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 MAGEA1P43355 309 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 GNPDA1P46926 289 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 PCBP4P57723 403 aaKnown RBP7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 ERVPABLB-1P60509 514 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 DYNLT1P63172 113 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 CCL7P80098 99 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 PPIDQ08752 370 aaKnown RBP7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 NIPAL4Q0D2K0 466 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 TBX2Q13207 712 aaPredicted RBP7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 BIRC2Q13490 618 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 PEX6Q13608 980 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 IHHQ14623 411 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 PDK1Q15118 436 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 TCEAL1Q15170 157 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 C14orf28Q4W4Y0 310 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 SLC9A4Q6AI14 798 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 DOK6Q6PKX4 331 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 RFLNAQ6ZTI6 216 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 BZW1Q7L1Q6 419 aaKnown RBP7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 NLRP8Q86W28 1048 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 RFX6Q8HWS3 928 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 NRSN1Q8IZ57 195 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 ARL14Q8N4G2 192 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 PLD5Q8N7P1 536 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 ZNF248Q8NDW4 579 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 EXD1Q8NHP7 514 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 WDR36Q8NI36 951 aaKnown RBP7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 KIAA1524Q8TCG1 905 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 CCHCR1Q8TD31 782 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 GPBAR1Q8TDU6 330 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 SCAMP4Q969E2 229 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 NAF1Q96HR8 494 aaKnown RBP7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 HIC2Q96JB3 615 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 SLC46A1Q96NT5 459 aa7.16□□□□□ -1.26
SNRPD3-205ENST00000468770 SMIM14Q96QK8 99 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms