RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 RAB6CQ53S08 254 aa15.8■□□□□ 0.12
TSSC4-208ENST00000467308 MANEAQ5SRI9 462 aa15.8■□□□□ 0.12
TSSC4-208ENST00000467308 CERCAMQ5T4B2 595 aa15.8■□□□□ 0.12
TSSC4-208ENST00000467308 RD3Q7Z3Z2 195 aa15.8■□□□□ 0.12
TSSC4-208ENST00000467308 ZSCAN1Q8NBB4 408 aa15.8■□□□□ 0.12
TSSC4-208ENST00000467308 BTBD6Q96KE9 485 aa15.8■□□□□ 0.12
TSSC4-208ENST00000467308 CMKLR1Q99788 373 aa15.8■□□□□ 0.12
TSSC4-208ENST00000467308 TUBB2BQ9BVA1 445 aa15.8■□□□□ 0.12
TSSC4-208ENST00000467308 TLR10Q9BXR5 811 aa15.8■□□□□ 0.12
TSSC4-208ENST00000467308 TRIM4Q9C037 500 aa15.8■□□□□ 0.12
TSSC4-208ENST00000467308 B3GNT4Q9C0J1 378 aa15.8■□□□□ 0.12
TSSC4-208ENST00000467308 RAB6CQ9H0N0 254 aa15.8■□□□□ 0.12
TSSC4-208ENST00000467308 PCDHGA4Q9Y5G9 962 aa15.8■□□□□ 0.12
TSSC4-208ENST00000467308 ARHGEF17Q96PE2 2063 aaPredicted RBP15.8■□□□□ 0.12
TSSC4-208ENST00000467308 PRAMEF33A0A0G2JMD5 474 aa15.79■□□□□ 0.12
TSSC4-208ENST00000467308 CCDC66A2RUB6 948 aa15.79■□□□□ 0.12
TSSC4-208ENST00000467308 PRAMEF10O60809 474 aa15.79■□□□□ 0.12
TSSC4-208ENST00000467308 FTCDO95954 541 aa15.79■□□□□ 0.12
TSSC4-208ENST00000467308 TNFP01375 233 aa15.79■□□□□ 0.12
TSSC4-208ENST00000467308 FAM87AP0C7U9 286 aa15.79■□□□□ 0.12
TSSC4-208ENST00000467308 PSMA2P25787 234 aa15.79■□□□□ 0.12
TSSC4-208ENST00000467308 CD82P27701 267 aa15.79■□□□□ 0.12
TSSC4-208ENST00000467308 CTNNA1P35221 906 aaKnown RBP15.79■□□□□ 0.12
TSSC4-208ENST00000467308 MTM1Q13496 603 aa15.79■□□□□ 0.12
TSSC4-208ENST00000467308 GRM3Q14832 879 aa15.79■□□□□ 0.12
TSSC4-208ENST00000467308 UGP2Q16851 508 aa15.79■□□□□ 0.12
TSSC4-208ENST00000467308 OGFOD3Q6PK18 319 aa15.79■□□□□ 0.12
TSSC4-208ENST00000467308 POLNQ7Z5Q5 900 aa15.79■□□□□ 0.12
TSSC4-208ENST00000467308 DTX1Q86Y01 620 aa15.79■□□□□ 0.12
TSSC4-208ENST00000467308 ZNF354CQ86Y25 554 aa15.79■□□□□ 0.12
TSSC4-208ENST00000467308 RTL3Q8N8U3 475 aaKnown RBP15.79■□□□□ 0.12
TSSC4-208ENST00000467308 NTAN1Q96AB6 310 aa15.79■□□□□ 0.12
TSSC4-208ENST00000467308 HMCESQ96FZ2 354 aa15.79■□□□□ 0.12
TSSC4-208ENST00000467308 WDR92Q96MX6 357 aa15.79■□□□□ 0.12
TSSC4-208ENST00000467308 NOL6Q9H6R4 1146 aaKnown RBP15.79■□□□□ 0.12
TSSC4-208ENST00000467308 COQ6Q9Y2Z9 468 aa15.79■□□□□ 0.12
TSSC4-208ENST00000467308 OR1A2Q9Y585 309 aa15.79■□□□□ 0.12
TSSC4-208ENST00000467308 PCDHB11Q9Y5F2 797 aa15.79■□□□□ 0.12
TSSC4-208ENST00000467308 ANKRD36A6QL64 1941 aa15.78■□□□□ 0.12
TSSC4-208ENST00000467308 CES2O00748 559 aa15.78■□□□□ 0.12
TSSC4-208ENST00000467308 PSTPIP1O43586 416 aa15.78■□□□□ 0.12
TSSC4-208ENST00000467308 SPOPO43791 374 aa15.78■□□□□ 0.12
TSSC4-208ENST00000467308 RNF8O76064 485 aa15.78■□□□□ 0.12
TSSC4-208ENST00000467308 ITIH1P19827 911 aa15.78■□□□□ 0.12
TSSC4-208ENST00000467308 HDAC4P56524 1084 aa15.78■□□□□ 0.12
TSSC4-208ENST00000467308 YBEYP58557 167 aaPredicted RBP15.78■□□□□ 0.12
TSSC4-208ENST00000467308 RPS6KA1Q15418 735 aa15.78■□□□□ 0.12
TSSC4-208ENST00000467308 TCEA2Q15560 299 aa15.78■□□□□ 0.12
TSSC4-208ENST00000467308 ERAP2Q6P179 960 aa15.78■□□□□ 0.12
TSSC4-208ENST00000467308 SPRED1Q7Z699 444 aa15.78■□□□□ 0.12
TSSC4-208ENST00000467308 CCDC185Q8N715 623 aa15.78■□□□□ 0.12
TSSC4-208ENST00000467308 PDXPQ96GD0 296 aa15.78■□□□□ 0.12
TSSC4-208ENST00000467308 ZNF641Q96N77 438 aaPredicted RBP15.78■□□□□ 0.12
TSSC4-208ENST00000467308 MAGEB5Q9BZ81 275 aa15.78■□□□□ 0.12
TSSC4-208ENST00000467308 GOLPH3Q9H4A6 298 aa15.78■□□□□ 0.12
TSSC4-208ENST00000467308 SUV39H2Q9H5I1 410 aa15.78■□□□□ 0.12
TSSC4-208ENST00000467308 PCDH12Q9NPG4 1184 aa15.78■□□□□ 0.12
TSSC4-208ENST00000467308 SNX12Q9UMY4 172 aa15.78■□□□□ 0.12
TSSC4-208ENST00000467308 PCDHA3Q9Y5H8 950 aa15.78■□□□□ 0.12
TSSC4-208ENST00000467308 DOPEY2Q9Y3R5 2298 aa15.78■□□□□ 0.12
TSSC4-208ENST00000467308 CFAP69A5D8W1 941 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.77■□□□□ 0.12
TSSC4-208ENST00000467308 INSIG1O15503 277 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 NUDT21O43809 227 aaKnown RBP15.77■□□□□ 0.12
TSSC4-208ENST00000467308 LRCH4O75427 683 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 PIGNO95427 931 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 ATP1A1P05023 1023 aaKnown RBP15.77■□□□□ 0.12
TSSC4-208ENST00000467308 TCP1P17987 556 aaKnown RBP15.77■□□□□ 0.12
TSSC4-208ENST00000467308 MMP12P39900 470 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 LIG3P49916 1009 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 KIAA1024LP59773 190 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 SRSF1Q07955 248 aaKnown RBP eCLIP15.77■□□□□ 0.12
TSSC4-208ENST00000467308 SERINC3Q13530 473 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 TBR1Q16650 682 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 PARP15Q460N3 678 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 C14orf28Q4W4Y0 310 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 BRAT1Q6PJG6 821 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 SLITRK4Q8IW52 837 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 RHOT1Q8IXI2 618 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 ARFGAP1Q8N6T3 406 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 UBL4BQ8N7F7 174 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 Q8N9G6 341 aaPredicted RBP15.77■□□□□ 0.12
TSSC4-208ENST00000467308 FAM46DQ8NEK8 389 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 FAM172AQ8WUF8 416 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 USP7Q93009 1102 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 KLC2Q9H0B6 622 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 FOXJ2Q9P0K8 574 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 LHX3Q9UBR4 397 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.77■□□□□ 0.12
TSSC4-208ENST00000467308 RNF215Q9Y6U7 377 aa15.77■□□□□ 0.12
TSSC4-208ENST00000467308 C9orf172C9J069 976 aa15.76■□□□□ 0.11
TSSC4-208ENST00000467308 TNFRSF10CO14798 259 aa15.76■□□□□ 0.11
TSSC4-208ENST00000467308 DDX3YO15523 660 aaKnown RBP15.76■□□□□ 0.11
TSSC4-208ENST00000467308 PPFIA2O75334 1257 aa15.76■□□□□ 0.11
TSSC4-208ENST00000467308 PCCBP05166 539 aa15.76■□□□□ 0.11
TSSC4-208ENST00000467308 HOXC4P09017 264 aaPredicted RBP15.76■□□□□ 0.11
TSSC4-208ENST00000467308 KELP23276 732 aa15.76■□□□□ 0.11
TSSC4-208ENST00000467308 EPHB2P29323 1055 aa15.76■□□□□ 0.11
TSSC4-208ENST00000467308 ETV5P41161 510 aa15.76■□□□□ 0.11
TSSC4-208ENST00000467308 NFKB2Q00653 900 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms