RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 CASRP41180 1078 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 MTA1Q13330 715 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 EIF3IQ13347 325 aaKnown RBP5.6□□□□□ -1.51
PTCD3-207ENST00000467273 MORC3Q14149 939 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 KCNJ12Q14500 433 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 GRAMD1BQ3KR37 738 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 ZSCAN23Q3MJ62 389 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 C3orf38Q5JPI3 329 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 PRAMEF14Q5SWL7 426 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 ARL6IP4Q66PJ3 421 aaKnown RBP5.6□□□□□ -1.51
PTCD3-207ENST00000467273 TMEM215Q68D42 235 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 CCDC70Q6NSX1 233 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 PGM2L1Q6PCE3 622 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 ZNF720Q7Z2F6 126 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 GPBP1Q86WP2 473 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 WDR49Q8IV35 697 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 TRIM48Q8IWZ4 208 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 FAM217AQ8IXS0 508 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.6□□□□□ -1.51
PTCD3-207ENST00000467273 C1orf162Q8NEQ5 155 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-207ENST00000467273 OR6B3Q8NGW1 331 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 WDR36Q8NI36 951 aaKnown RBP5.6□□□□□ -1.51
PTCD3-207ENST00000467273 ANP32BQ92688 251 aaKnown RBP5.6□□□□□ -1.51
PTCD3-207ENST00000467273 EXTL1Q92935 676 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 PEX11GQ96HA9 241 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 PRR11Q96HE9 360 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-207ENST00000467273 FAXDC2Q96IV6 333 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 AK8Q96MA6 479 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 KCNK16Q96T55 309 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 GORASP1Q9BQQ3 440 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 STRA6Q9BX79 667 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 CDH19Q9H159 772 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 PPCSQ9HAB8 311 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 EBF2Q9HAK2 575 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 PRSS16Q9NQE7 514 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.6□□□□□ -1.51
PTCD3-207ENST00000467273 NLGN3Q9NZ94 848 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 CLIC5Q9NZA1 410 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 SEPT10Q9P0V9 454 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 UBE4BO95155 1302 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 CCDC187A0A096LP49 1063 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 A8MXQ7 604 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 TISP43B9A030 160 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 CLDN5O00501 218 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 KDM1AO60341 852 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 H2AFYO75367 372 aaKnown RBP5.59□□□□□ -1.51
PTCD3-207ENST00000467273 PRPF6O94906 941 aaKnown RBP5.59□□□□□ -1.51
PTCD3-207ENST00000467273 LATS1O95835 1130 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 TBX18O95935 607 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 KLKB1P03952 638 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 MMEP08473 750 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 LIPCP11150 499 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 KRT10P13645 584 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 GOT1P17174 413 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 TRIM21P19474 475 aaKnown RBP5.59□□□□□ -1.51
PTCD3-207ENST00000467273 DGKAP23743 735 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 CCND1P24385 295 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 CD40P25942 277 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 RPL13P26373 211 aaKnown RBP5.59□□□□□ -1.51
PTCD3-207ENST00000467273 ELAVL4P26378 380 aaKnown RBP5.59□□□□□ -1.51
PTCD3-207ENST00000467273 ATICP31939 592 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 THBS2P35442 1172 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 TNNC1P63316 161 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 SLC9A5Q14940 896 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 CST6Q15828 149 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 IL17AQ16552 155 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 KRTAP21-3Q3LHN1 58 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 MPPE1Q53F39 396 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 FAM26FQ5R3K3 315 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 C10orf120Q5SQS8 335 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 MPP7Q5T2T1 576 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 RBM44Q6ZP01 1051 aaKnown RBP5.59□□□□□ -1.51
PTCD3-207ENST00000467273 FRMD7Q6ZUT3 714 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 C14orf80Q86SX3 495 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 PRPF39Q86UA1 669 aaKnown RBP5.59□□□□□ -1.51
PTCD3-207ENST00000467273 ZZZ3Q8IYH5 903 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 SLC25A45Q8N413 288 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 LINC00482Q8N8I6 264 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 FBXO18Q8NFZ0 1043 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 MAPK15Q8TD08 544 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 GANCQ8TET4 914 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 DDI1Q8WTU0 396 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 CALML4Q96GE6 196 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 C8orf76Q96K31 380 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 ACCSQ96QU6 501 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 OMDQ99983 421 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 MRPL45Q9BRJ2 306 aaKnown RBP5.59□□□□□ -1.51
PTCD3-207ENST00000467273 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.59□□□□□ -1.51
PTCD3-207ENST00000467273 DEF6Q9H4E7 631 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 KIAA1586Q9HCI6 787 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 PDE11AQ9HCR9 933 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 KLHL11Q9NVR0 708 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 PLEKHB1Q9UF11 243 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-207ENST00000467273 IP6K2Q9UHH9 426 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 ZNF180Q9UJW8 692 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 LUC7L2Q9Y383 392 aaKnown RBP5.59□□□□□ -1.51
PTCD3-207ENST00000467273 ENTPD2Q9Y5L3 495 aa5.59□□□□□ -1.51
PTCD3-207ENST00000467273 COL27A1Q8IZC6 1860 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-207ENST00000467273 OTOGQ6ZRI0 2925 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 A0A1W2PNU3 283 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms