RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 SCAIQ8N9R8 606 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 OR10V1Q8NGI7 309 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 TRAPPC12Q8WVT3 735 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 RUBCNQ92622 972 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 C17orf77Q96MU5 243 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 TEFMQ96QE5 360 aaKnown RBP3.66□□□□□ -1.82
XRN1-206ENST00000467077 RPS6KC1Q96S38 1066 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 MSTO1Q9BUK6 570 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 TWSG1Q9GZX9 223 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 OR6C3Q9NZP0 311 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 ATRNO75882 1429 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 DCCP43146 1447 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 RGPD1P0DJD0 1748 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 NRXN3Q9Y4C0 1643 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 PLCH1Q4KWH8 1693 aa3.65□□□□□ -1.82
XRN1-206ENST00000467077 GLI3P10071 1580 aa3.65□□□□□ -1.82
XRN1-206ENST00000467077 ABCC5O15440 1437 aa3.65□□□□□ -1.83
XRN1-206ENST00000467077 BLMP54132 1417 aaPredicted RBP3.65□□□□□ -1.83
XRN1-206ENST00000467077 ADAMTS13Q76LX8 1427 aa3.65□□□□□ -1.83
XRN1-206ENST00000467077 PTPRUQ92729 1446 aa3.65□□□□□ -1.83
XRN1-206ENST00000467077 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.65□□□□□ -1.83
XRN1-206ENST00000467077 ADD2P35612 726 aa3.65□□□□□ -1.83
XRN1-206ENST00000467077 MVDP53602 400 aa3.65□□□□□ -1.83
XRN1-206ENST00000467077 IRX1P78414 480 aaPredicted RBP3.65□□□□□ -1.83
XRN1-206ENST00000467077 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
XRN1-206ENST00000467077 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
XRN1-206ENST00000467077 TRIM74Q86UV6 250 aa3.65□□□□□ -1.83
XRN1-206ENST00000467077 TRIM73Q86UV7 250 aa3.65□□□□□ -1.83
XRN1-206ENST00000467077 GALNT15Q8N3T1 639 aa3.65□□□□□ -1.83
XRN1-206ENST00000467077 HCAR2Q8TDS4 363 aa3.65□□□□□ -1.83
XRN1-206ENST00000467077 THAP4Q8WY91 577 aa3.65□□□□□ -1.83
XRN1-206ENST00000467077 TANKQ92844 425 aa3.65□□□□□ -1.83
XRN1-206ENST00000467077 SDCCAG3Q96C92 435 aa3.65□□□□□ -1.83
XRN1-206ENST00000467077 ZNF689Q96CS4 500 aaPredicted RBP3.65□□□□□ -1.83
XRN1-206ENST00000467077 ASCL2Q99929 193 aa3.65□□□□□ -1.83
XRN1-206ENST00000467077 PAGR1Q9BTK6 254 aa3.65□□□□□ -1.83
XRN1-206ENST00000467077 FSD1Q9BTV5 496 aa3.65□□□□□ -1.83
XRN1-206ENST00000467077 CCDC177Q9NQR7 707 aaPredicted RBP3.65□□□□□ -1.83
XRN1-206ENST00000467077 PAK5Q9P286 719 aa3.65□□□□□ -1.83
XRN1-206ENST00000467077 RGPD8O14715 1765 aaPredicted RBP3.65□□□□□ -1.83
XRN1-206ENST00000467077 IQGAP3Q86VI3 1631 aa3.65□□□□□ -1.83
XRN1-206ENST00000467077 RPRD2Q5VT52 1461 aaKnown RBP3.65□□□□□ -1.83
XRN1-206ENST00000467077 KIF1BO60333 1816 aa3.65□□□□□ -1.83
XRN1-206ENST00000467077 PIK3R4Q99570 1358 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 ANKRD30AQ9BXX3 1397 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 DAPK1P53355 1430 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 PTCH1Q13635 1447 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 MEIOCA2RUB1 952 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 METTL18O95568 372 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 PRG2P13727 222 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 CD53P19397 219 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 SKIV2L2P42285 1042 aaKnown RBP3.64□□□□□ -1.83
XRN1-206ENST00000467077 PITX1P78337 314 aaPredicted RBP3.64□□□□□ -1.83
XRN1-206ENST00000467077 SLC20A2Q08357 652 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 ZNF155Q12901 538 aaPredicted RBP3.64□□□□□ -1.83
XRN1-206ENST00000467077 OS9Q13438 667 aaPredicted RBP3.64□□□□□ -1.83
XRN1-206ENST00000467077 PRKG1Q13976 671 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 POSTNQ15063 836 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 PDCD2Q16342 344 aaPredicted RBP3.64□□□□□ -1.83
XRN1-206ENST00000467077 FAM83BQ5T0W9 1011 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 TBC1D9BQ66K14 1250 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 CEACAM20Q6UY09 585 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 CCDC129Q6ZRS4 1044 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 DSG4Q86SJ6 1040 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 CCDC105Q8IYK2 499 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 MYCT1Q8N699 235 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 ANKRD52Q8NB46 1076 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 FAM222BQ8WU58 562 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 CSF3RQ99062 836 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 PDZD7Q9H5P4 517 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 CHODLQ9H9P2 273 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 SLCO3A1Q9UIG8 710 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 DHDHQ9UQ10 334 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 RIPOR2Q9Y4F9 1068 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 BCL9LQ86UU0 1499 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 TNS1Q9HBL0 1735 aaKnown RBP3.64□□□□□ -1.83
XRN1-206ENST00000467077 NWD2Q9ULI1 1742 aa3.64□□□□□ -1.83
XRN1-206ENST00000467077 C1orf167Q5SNV9 1468 aa3.63□□□□□ -1.83
XRN1-206ENST00000467077 hCG_1642624A0A1W2PR95 340 aa3.63□□□□□ -1.83
XRN1-206ENST00000467077 TARSL2A2RTX5 802 aaKnown RBP3.63□□□□□ -1.83
XRN1-206ENST00000467077 KRTAP16-1A8MUX0 517 aa3.63□□□□□ -1.83
XRN1-206ENST00000467077 STRNO43815 780 aa3.63□□□□□ -1.83
XRN1-206ENST00000467077 TK1P04183 234 aa3.63□□□□□ -1.83
XRN1-206ENST00000467077 NR1D1P20393 614 aa3.63□□□□□ -1.83
XRN1-206ENST00000467077 MTNR1AP48039 350 aa3.63□□□□□ -1.83
XRN1-206ENST00000467077 TRAPPC10P48553 1259 aa3.63□□□□□ -1.83
XRN1-206ENST00000467077 AARSP49588 968 aaKnown RBP eCLIP3.63□□□□□ -1.83
XRN1-206ENST00000467077 ARHGAP8P85298 464 aa3.63□□□□□ -1.83
XRN1-206ENST00000467077 BYSLQ13895 437 aaKnown RBP3.63□□□□□ -1.83
XRN1-206ENST00000467077 AP5B1Q2VPB7 878 aa3.63□□□□□ -1.83
XRN1-206ENST00000467077 C10orf62Q5T681 223 aaPredicted RBP3.63□□□□□ -1.83
XRN1-206ENST00000467077 LCTLQ6UWM7 567 aa3.63□□□□□ -1.83
XRN1-206ENST00000467077 SLC24A4Q8NFF2 622 aa3.63□□□□□ -1.83
XRN1-206ENST00000467077 LINS1Q8NG48 757 aa3.63□□□□□ -1.83
XRN1-206ENST00000467077 ALG14Q96F25 216 aa3.63□□□□□ -1.83
XRN1-206ENST00000467077 RPS10P5Q9NQ39 176 aa3.63□□□□□ -1.83
XRN1-206ENST00000467077 FAM118AQ9NWS6 357 aa3.63□□□□□ -1.83
XRN1-206ENST00000467077 TMEM160Q9NX00 188 aa3.63□□□□□ -1.83
XRN1-206ENST00000467077 KIF17Q9P2E2 1029 aa3.63□□□□□ -1.83
XRN1-206ENST00000467077 KLF2Q9Y5W3 355 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms