RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 HEXIM1O94992 359 aaKnown RBP11.94□□□□□ -0.5
GTF3A-205ENST00000466776 WISP1O95388 367 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 PCK1P35558 622 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 ETV5P41161 510 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 GPR1P46091 355 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 PPM1FP49593 454 aaPredicted RBP11.94□□□□□ -0.5
GTF3A-205ENST00000466776 CDH6P55285 790 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 MAZP56270 477 aaKnown RBP11.94□□□□□ -0.5
GTF3A-205ENST00000466776 CDK3Q00526 305 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 B4GALNT1Q00973 533 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 DPYSQ14117 519 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 NR1D2Q14995 579 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 DPYSL2Q16555 572 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 BOLA3Q53S33 107 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 ARMC12Q5T9G4 340 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 KCTD16Q68DU8 428 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 SLC30A9Q6PML9 568 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 ARHGAP36Q6ZRI8 547 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 NYAP1Q6ZVC0 841 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 ZFAND4Q86XD8 727 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 CCL4L1Q8NHW4 92 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 EXTL1Q92935 676 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 TAAR9Q96RI9 348 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 MGME1Q9BQP7 344 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 SEMA6CQ9H3T2 930 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 RDH14Q9HBH5 336 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 DNPEPQ9ULA0 475 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 SUFUQ9UMX1 484 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 PCDHGC4Q9Y5F7 938 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 PCDHGA4Q9Y5G9 962 aa11.94□□□□□ -0.5
GTF3A-205ENST00000466776 C9orf172C9J069 976 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 PPFIA2O75334 1257 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 ECEL1O95672 775 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 FTLP02792 175 aaPredicted RBP11.93□□□□□ -0.5
GTF3A-205ENST00000466776 CEACAM5P06731 702 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 IVLP07476 585 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 GM2AP17900 193 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 CSTF2P33240 577 aaKnown RBP eCLIP11.93□□□□□ -0.5
GTF3A-205ENST00000466776 ETV3P41162 512 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 MMP13P45452 471 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 OR1D5P58170 312 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 KLHL30Q0D2K2 578 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 C16orf72Q14CZ0 275 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 LINC00303Q3SY05 128 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 MARC1Q5VT66 337 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 ATG14Q6ZNE5 492 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 VASH2Q86V25 355 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 C17orf82Q86X59 251 aaPredicted RBP11.93□□□□□ -0.5
GTF3A-205ENST00000466776 ARFGAP1Q8N6T3 406 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 AGBL5Q8NDL9 886 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 HSPH1Q92598 858 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 COL26A1Q96A83 441 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 SCRN2Q96FV2 425 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 AHCYL2Q96HN2 611 aaKnown RBP11.93□□□□□ -0.5
GTF3A-205ENST00000466776 SYT11Q9BT88 431 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 FRMD8Q9BZ67 464 aaPredicted RBP11.93□□□□□ -0.5
GTF3A-205ENST00000466776 STN1Q9H668 368 aaKnown RBP11.93□□□□□ -0.5
GTF3A-205ENST00000466776 HAUS4Q9H6D7 363 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 SPATS2LQ9NUQ6 558 aaKnown RBP11.93□□□□□ -0.5
GTF3A-205ENST00000466776 FOXJ2Q9P0K8 574 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 MYO1AQ9UBC5 1043 aa11.93□□□□□ -0.5
GTF3A-205ENST00000466776 B4GAT1O43505 415 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 PGLSO95336 258 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 FGF1P05230 155 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 ZNF30P17039 623 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 CR2P20023 1033 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 CA4P22748 312 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 AK4P27144 223 aaPredicted RBP11.92□□□□□ -0.5
GTF3A-205ENST00000466776 MAN1A1P33908 653 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 ANP32AP39687 249 aaKnown RBP11.92□□□□□ -0.5
GTF3A-205ENST00000466776 ACTR1BP42025 376 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 CSRP3P50461 194 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 LIMK2P53671 638 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 EPHB1P54762 984 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 RAB15P59190 212 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 ACTR1AP61163 376 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 GPLD1P80108 840 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 DPTQ07507 201 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 LRP8Q14114 963 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 PIGHQ14442 188 aaPredicted RBP11.92□□□□□ -0.5
GTF3A-205ENST00000466776 SMTNL2Q2TAL5 461 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 APTXQ7Z2E3 356 aaKnown RBP11.92□□□□□ -0.5
GTF3A-205ENST00000466776 DTX1Q86Y01 620 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 LRRC49Q8IUZ0 686 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 SFTPA2Q8IWL1 248 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 PELI3Q8N2H9 469 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 AOPEPQ8N6M6 819 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 IL22RA1Q8N6P7 574 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 EXD3Q8N9H8 876 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 OR4D9Q8NGE8 314 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 AP2M1Q96CW1 435 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 CCDC74BQ96LY2 380 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 OR2M4Q96R27 311 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 SEMA3CQ99985 751 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 NUDT22Q9BRQ3 303 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 ASPSCR1Q9BZE9 553 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 NOD2Q9HC29 1040 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 STARD5Q9NSY2 213 aa11.92□□□□□ -0.5
GTF3A-205ENST00000466776 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.92□□□□□ -0.5
GTF3A-205ENST00000466776 KCNK4Q9NYG8 393 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms