RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 SCRN2Q96FV2 425 aa19.14■□□□□ 0.65
COL9A3-206ENST00000466532 GSDMCQ9BYG8 508 aa19.14■□□□□ 0.65
COL9A3-206ENST00000466532 FRMD8Q9BZ67 464 aaPredicted RBP19.14■□□□□ 0.65
COL9A3-206ENST00000466532 NT5MQ9NPB1 228 aa19.14■□□□□ 0.65
COL9A3-206ENST00000466532 SPATS2LQ9NUQ6 558 aaKnown RBP19.14■□□□□ 0.65
COL9A3-206ENST00000466532 PISDQ9UG56 409 aa19.14■□□□□ 0.65
COL9A3-206ENST00000466532 COL6A6A6NMZ7 2263 aa19.14■□□□□ 0.65
COL9A3-206ENST00000466532 FUCA1P04066 466 aa19.13■□□□□ 0.65
COL9A3-206ENST00000466532 SERPING1P05155 500 aa19.13■□□□□ 0.65
COL9A3-206ENST00000466532 CTPS1P17812 591 aa19.13■□□□□ 0.65
COL9A3-206ENST00000466532 GNPDA1P46926 289 aa19.13■□□□□ 0.65
COL9A3-206ENST00000466532 TPM4P67936 248 aa19.13■□□□□ 0.65
COL9A3-206ENST00000466532 CDK3Q00526 305 aa19.13■□□□□ 0.65
COL9A3-206ENST00000466532 FANCCQ00597 558 aa19.13■□□□□ 0.65
COL9A3-206ENST00000466532 ZFP36L1Q07352 338 aaKnown RBP19.13■□□□□ 0.65
COL9A3-206ENST00000466532 ILF3Q12906 894 aaKnown RBP eCLIP19.13■□□□□ 0.65
COL9A3-206ENST00000466532 MMRN1Q13201 1228 aa19.13■□□□□ 0.65
COL9A3-206ENST00000466532 KIAA1614Q5VZ46 1190 aa19.13■□□□□ 0.65
COL9A3-206ENST00000466532 ZNF605Q86T29 641 aa19.13■□□□□ 0.65
COL9A3-206ENST00000466532 TSPAN33Q86UF1 283 aa19.13■□□□□ 0.65
COL9A3-206ENST00000466532 NRROSQ86YC3 692 aa19.13■□□□□ 0.65
COL9A3-206ENST00000466532 ZDHHC1Q8WTX9 485 aa19.13■□□□□ 0.65
COL9A3-206ENST00000466532 MCCC1Q96RQ3 725 aaPredicted RBP19.13■□□□□ 0.65
COL9A3-206ENST00000466532 CCNL2Q96S94 520 aaPredicted RBP19.13■□□□□ 0.65
COL9A3-206ENST00000466532 RCOR3Q9P2K3 495 aaPredicted RBP19.13■□□□□ 0.65
COL9A3-206ENST00000466532 A0A087X0T9 212 aa19.12■□□□□ 0.65
COL9A3-206ENST00000466532 CAPN8A6NHC0 703 aa19.12■□□□□ 0.65
COL9A3-206ENST00000466532 CYP1A2P05177 515 aa19.12■□□□□ 0.65
COL9A3-206ENST00000466532 CD48P09326 243 aa19.12■□□□□ 0.65
COL9A3-206ENST00000466532 FAM228BP0C875 321 aa19.12■□□□□ 0.65
COL9A3-206ENST00000466532 IL4RP24394 825 aa19.12■□□□□ 0.65
COL9A3-206ENST00000466532 AK4P27144 223 aaPredicted RBP19.12■□□□□ 0.65
COL9A3-206ENST00000466532 TEAD1P28347 426 aa19.12■□□□□ 0.65
COL9A3-206ENST00000466532 PBX1P40424 430 aa19.12■□□□□ 0.65
COL9A3-206ENST00000466532 MAZP56270 477 aaKnown RBP19.12■□□□□ 0.65
COL9A3-206ENST00000466532 ITKQ08881 620 aa19.12■□□□□ 0.65
COL9A3-206ENST00000466532 NFKBIBQ15653 356 aa19.12■□□□□ 0.65
COL9A3-206ENST00000466532 MAP9Q49MG5 647 aa19.12■□□□□ 0.65
COL9A3-206ENST00000466532 TMPRSS9Q7Z410 1059 aa19.12■□□□□ 0.65
COL9A3-206ENST00000466532 LUZP1Q86V48 1076 aa19.12■□□□□ 0.65
COL9A3-206ENST00000466532 TEX26Q8N6G2 289 aa19.12■□□□□ 0.65
COL9A3-206ENST00000466532 PTCD2Q8WV60 388 aaKnown RBP19.12■□□□□ 0.65
COL9A3-206ENST00000466532 CPLX3Q8WVH0 158 aa19.12■□□□□ 0.65
COL9A3-206ENST00000466532 PIH1D2Q8WWB5 315 aa19.12■□□□□ 0.65
COL9A3-206ENST00000466532 TMEM159Q96B96 161 aa19.12■□□□□ 0.65
COL9A3-206ENST00000466532 SEMA3CQ99985 751 aa19.12■□□□□ 0.65
COL9A3-206ENST00000466532 CBX8Q9HC52 389 aa19.12■□□□□ 0.65
COL9A3-206ENST00000466532 TRNAU1APQ9NX07 287 aaKnown RBP19.12■□□□□ 0.65
COL9A3-206ENST00000466532 TAAR2Q9P1P5 351 aa19.12■□□□□ 0.65
COL9A3-206ENST00000466532 SUFUQ9UMX1 484 aa19.12■□□□□ 0.65
COL9A3-206ENST00000466532 A0A0U1RQS6 177 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 RHPN2P1A8MT19 583 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 MYO1FO00160 1098 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 MFSD11O43934 449 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 FGF1P05230 155 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 PDHA1P08559 390 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 KRT10P13645 584 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 PLA2G2AP14555 144 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 ITIH1P19827 911 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 GPR1P46091 355 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 POLD2P49005 469 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 UBASH3AP57075 661 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 ZBED6P86452 979 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 B4GALNT1Q00973 533 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 LY6DQ14210 128 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 HADHQ16836 314 aaKnown RBP19.11■□□□□ 0.65
COL9A3-206ENST00000466532 CCDC122Q5T0U0 273 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 PHF19Q5T6S3 580 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 SLC30A9Q6PML9 568 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 TECPR1Q7Z6L1 1165 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 LRRC49Q8IUZ0 686 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 SLITRK4Q8IW52 837 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 NDUFAF2Q8N183 169 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 FAM71BQ8TC56 605 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 CMKLR1Q99788 373 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 SEMA4CQ9C0C4 833 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 POLR1EQ9GZS1 481 aaKnown RBP19.11■□□□□ 0.65
COL9A3-206ENST00000466532 CD84Q9UIB8 345 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 ACSL6Q9UKU0 697 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 SLC17A4Q9Y2C5 497 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 PPIL1Q9Y3C6 166 aa19.11■□□□□ 0.65
COL9A3-206ENST00000466532 SDK2Q58EX2 2172 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 SYCE3A1L190 88 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 NVLO15381 856 aaKnown RBP19.1■□□□□ 0.65
COL9A3-206ENST00000466532 B4GAT1O43505 415 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 FZD6O60353 706 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 ECEL1O95672 775 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 CPNE6O95741 557 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 IVLP07476 585 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 GJC1P36383 396 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 ETV5P41161 510 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 GARSP41250 739 aaKnown RBP19.1■□□□□ 0.65
COL9A3-206ENST00000466532 MAPK10P53779 464 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 OR1D5P58170 312 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 CTBSQ01459 385 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 DPTQ07507 201 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 GALNT2Q10471 571 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 TGIF1Q15583 401 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 AMZ1Q400G9 498 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 LRRC66Q68CR7 880 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms