RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 PCDH9Q9HC56 1237 aa21.75■■□□□ 1.07
LIME1-203ENST00000465591 CYP4F12Q9HCS2 524 aa21.75■■□□□ 1.07
LIME1-203ENST00000465591 DDX56Q9NY93 547 aaKnown RBP21.75■■□□□ 1.07
LIME1-203ENST00000465591 SAE1Q9UBE0 346 aaPredicted RBP21.75■■□□□ 1.07
LIME1-203ENST00000465591 GULP1Q9UBP9 304 aa21.75■■□□□ 1.07
LIME1-203ENST00000465591 RABGEF1Q9UJ41 708 aa21.75■■□□□ 1.07
LIME1-203ENST00000465591 PADI4Q9UM07 663 aa21.75■■□□□ 1.07
LIME1-203ENST00000465591 DOLKQ9UPQ8 538 aa21.75■■□□□ 1.07
LIME1-203ENST00000465591 GPSM3Q9Y4H4 160 aa21.75■■□□□ 1.07
LIME1-203ENST00000465591 PRSS38A1L453 326 aa21.74■■□□□ 1.07
LIME1-203ENST00000465591 RCCD1A6NED2 376 aa21.74■■□□□ 1.07
LIME1-203ENST00000465591 CAPN8A6NHC0 703 aa21.74■■□□□ 1.07
LIME1-203ENST00000465591 SOWAHDA6NJG2 315 aa21.74■■□□□ 1.07
LIME1-203ENST00000465591 TNFRSF10CO14798 259 aa21.74■■□□□ 1.07
LIME1-203ENST00000465591 CSO75390 466 aaKnown RBP21.74■■□□□ 1.07
LIME1-203ENST00000465591 CEACAM5P06731 702 aa21.74■■□□□ 1.07
LIME1-203ENST00000465591 KRT10P13645 584 aa21.74■■□□□ 1.07
LIME1-203ENST00000465591 NFKBIAP25963 317 aa21.74■■□□□ 1.07
LIME1-203ENST00000465591 EPHB1P54762 984 aa21.74■■□□□ 1.07
LIME1-203ENST00000465591 CDK3Q00526 305 aa21.74■■□□□ 1.07
LIME1-203ENST00000465591 AP1B1Q10567 949 aa21.74■■□□□ 1.07
LIME1-203ENST00000465591 LVRNQ6Q4G3 990 aa21.74■■□□□ 1.07
LIME1-203ENST00000465591 C19orf48Q6RUI8 117 aa21.74■■□□□ 1.07
LIME1-203ENST00000465591 GKN2Q86XP6 184 aa21.74■■□□□ 1.07
LIME1-203ENST00000465591 CCDC170Q8IYT3 715 aa21.74■■□□□ 1.07
LIME1-203ENST00000465591 ARL10Q8N8L6 244 aa21.74■■□□□ 1.07
LIME1-203ENST00000465591 SCAMP4Q969E2 229 aa21.74■■□□□ 1.07
LIME1-203ENST00000465591 AGAP2Q99490 1192 aa21.74■■□□□ 1.07
LIME1-203ENST00000465591 ABCG4Q9H172 646 aa21.74■■□□□ 1.07
LIME1-203ENST00000465591 MOSPD1Q9UJG1 213 aa21.74■■□□□ 1.07
LIME1-203ENST00000465591 GPR34Q9UPC5 381 aa21.74■■□□□ 1.07
LIME1-203ENST00000465591 AK5Q9Y6K8 562 aa21.74■■□□□ 1.07
LIME1-203ENST00000465591 ITPR1Q14643 2758 aa21.73■■□□□ 1.07
LIME1-203ENST00000465591 GOLGA6CA6NDK9 693 aa21.73■■□□□ 1.07
LIME1-203ENST00000465591 GOLGA6BA6NDN3 693 aa21.73■■□□□ 1.07
LIME1-203ENST00000465591 TLX3O43711 291 aaPredicted RBP21.73■■□□□ 1.07
LIME1-203ENST00000465591 GOLGA6DP0CG33 693 aa21.73■■□□□ 1.07
LIME1-203ENST00000465591 PECAM1P16284 738 aaPredicted RBP21.73■■□□□ 1.07
LIME1-203ENST00000465591 FECHP22830 423 aa21.73■■□□□ 1.07
LIME1-203ENST00000465591 KELP23276 732 aa21.73■■□□□ 1.07
LIME1-203ENST00000465591 RPIAP49247 311 aa21.73■■□□□ 1.07
LIME1-203ENST00000465591 STC1P52823 247 aa21.73■■□□□ 1.07
LIME1-203ENST00000465591 PDK1Q15118 436 aa21.73■■□□□ 1.07
LIME1-203ENST00000465591 QPCTQ16769 361 aa21.73■■□□□ 1.07
LIME1-203ENST00000465591 RAET1GQ6H3X3 334 aa21.73■■□□□ 1.07
LIME1-203ENST00000465591 GLMNQ92990 594 aa21.73■■□□□ 1.07
LIME1-203ENST00000465591 PANX2Q96RD6 677 aa21.73■■□□□ 1.07
LIME1-203ENST00000465591 FRMD8Q9BZ67 464 aaPredicted RBP21.73■■□□□ 1.07
LIME1-203ENST00000465591 SUDS3Q9H7L9 328 aaPredicted RBP21.73■■□□□ 1.07
LIME1-203ENST00000465591 PHPT1Q9NRX4 125 aaPredicted RBP21.73■■□□□ 1.07
LIME1-203ENST00000465591 GOLGA6AQ9NYA3 693 aa21.73■■□□□ 1.07
LIME1-203ENST00000465591 ZFC3H1O60293 1989 aaKnown RBP21.73■■□□□ 1.07
LIME1-203ENST00000465591 PSTPIP1O43586 416 aa21.72■■□□□ 1.07
LIME1-203ENST00000465591 BRINP1O60477 761 aa21.72■■□□□ 1.07
LIME1-203ENST00000465591 CLDN7O95471 211 aa21.72■■□□□ 1.07
LIME1-203ENST00000465591 ZFXP17010 805 aaPredicted RBP21.72■■□□□ 1.07
LIME1-203ENST00000465591 TEAD1P28347 426 aa21.72■■□□□ 1.07
LIME1-203ENST00000465591 POLD2P49005 469 aa21.72■■□□□ 1.07
LIME1-203ENST00000465591 DPTQ07507 201 aa21.72■■□□□ 1.07
LIME1-203ENST00000465591 SPOCD1Q6ZMY3 1216 aa21.72■■□□□ 1.07
LIME1-203ENST00000465591 TAF8Q7Z7C8 310 aa21.72■■□□□ 1.07
LIME1-203ENST00000465591 NDUFAF2Q8N183 169 aa21.72■■□□□ 1.07
LIME1-203ENST00000465591 SDR16C5Q8N3Y7 309 aa21.72■■□□□ 1.07
LIME1-203ENST00000465591 GPR156Q8NFN8 814 aa21.72■■□□□ 1.07
LIME1-203ENST00000465591 SCG3Q8WXD2 468 aaKnown RBP21.72■■□□□ 1.07
LIME1-203ENST00000465591 NAT6Q93015 286 aa21.72■■□□□ 1.07
LIME1-203ENST00000465591 AP2M1Q96CW1 435 aa21.72■■□□□ 1.07
LIME1-203ENST00000465591 AGAP3Q96P47 875 aa21.72■■□□□ 1.07
LIME1-203ENST00000465591 DEPDC7Q96QD5 511 aa21.72■■□□□ 1.07
LIME1-203ENST00000465591 LYSMD1Q96S90 227 aa21.72■■□□□ 1.07
LIME1-203ENST00000465591 CCDC3Q9BQI4 270 aa21.72■■□□□ 1.07
LIME1-203ENST00000465591 BRD8Q9H0E9 1235 aa21.72■■□□□ 1.07
LIME1-203ENST00000465591 KCTD5Q9NXV2 234 aa21.72■■□□□ 1.07
LIME1-203ENST00000465591 SEPT10Q9P0V9 454 aa21.72■■□□□ 1.07
LIME1-203ENST00000465591 REXO2Q9Y3B8 237 aaKnown RBP21.72■■□□□ 1.07
LIME1-203ENST00000465591 ST14Q9Y5Y6 855 aa21.72■■□□□ 1.07
LIME1-203ENST00000465591 A0A0A6YYK5 440 aaPredicted RBP21.71■■□□□ 1.07
LIME1-203ENST00000465591 A0A1W2PNU3 283 aaPredicted RBP21.71■■□□□ 1.07
LIME1-203ENST00000465591 NOBOXO60393 691 aa21.71■■□□□ 1.07
LIME1-203ENST00000465591 ZNF30P17039 623 aa21.71■■□□□ 1.07
LIME1-203ENST00000465591 CYLC1P35663 651 aaPredicted RBP21.71■■□□□ 1.07
LIME1-203ENST00000465591 RPL26P61254 145 aaKnown RBP21.71■■□□□ 1.07
LIME1-203ENST00000465591 ISXQ2M1V0 245 aa21.71■■□□□ 1.07
LIME1-203ENST00000465591 KAZNQ674X7 775 aa21.71■■□□□ 1.07
LIME1-203ENST00000465591 RAD9BQ6WBX8 426 aa21.71■■□□□ 1.07
LIME1-203ENST00000465591 TRIM74Q86UV6 250 aa21.71■■□□□ 1.07
LIME1-203ENST00000465591 NRROSQ86YC3 692 aa21.71■■□□□ 1.07
LIME1-203ENST00000465591 KRT35Q92764 455 aa21.71■■□□□ 1.07
LIME1-203ENST00000465591 CCDC74AQ96AQ1 378 aa21.71■■□□□ 1.07
LIME1-203ENST00000465591 IMP4Q96G21 291 aaKnown RBP21.71■■□□□ 1.07
LIME1-203ENST00000465591 TRIB3Q96RU7 358 aa21.71■■□□□ 1.07
LIME1-203ENST00000465591 WDR24Q96S15 920 aa21.71■■□□□ 1.07
LIME1-203ENST00000465591 CARS2Q9HA77 564 aaKnown RBP21.71■■□□□ 1.07
LIME1-203ENST00000465591 HAUS2Q9NVX0 235 aa21.71■■□□□ 1.07
LIME1-203ENST00000465591 RPL26L1Q9UNX3 145 aaKnown RBP21.71■■□□□ 1.07
LIME1-203ENST00000465591 EPN1Q9Y6I3 576 aaPredicted RBP21.71■■□□□ 1.07
LIME1-203ENST00000465591 PDE2AO00408 941 aaPredicted RBP21.7■■□□□ 1.06
LIME1-203ENST00000465591 PPP1R12AO14974 1030 aaPredicted RBP21.7■■□□□ 1.06
LIME1-203ENST00000465591 CST8O60676 142 aa21.7■■□□□ 1.06
LIME1-203ENST00000465591 USP12O75317 370 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms