RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 TMEM181Q9P2C4 612 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 DNAJC15Q9Y5T4 150 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 SNX13Q9Y5W8 968 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 UBXN8O00124 270 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 PRAMEF11O60813 436 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 RTN3O95197 1032 aaPredicted RBP18.31■□□□□ 0.52
SYNE4-204ENST00000465425 SIX3O95343 332 aaPredicted RBP18.31■□□□□ 0.52
SYNE4-204ENST00000465425 EPOP01588 193 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 MAPKAPK2P49137 400 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 SLC7A2P52569 658 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 CDKL1Q00532 357 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 TRIM32Q13049 653 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 MGAT5BQ3V5L5 792 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 FAM219BQ5XKK7 198 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 IYDQ6PHW0 289 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 DDIASQ8IXT1 998 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 PPWD1Q96BP3 646 aaKnown RBP18.31■□□□□ 0.52
SYNE4-204ENST00000465425 ZFRQ96KR1 1074 aaKnown RBP18.31■□□□□ 0.52
SYNE4-204ENST00000465425 PRPF18Q99633 342 aaKnown RBP18.31■□□□□ 0.52
SYNE4-204ENST00000465425 MRPS26Q9BYN8 205 aaKnown RBP18.31■□□□□ 0.52
SYNE4-204ENST00000465425 EPB41L1Q9H4G0 881 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 POPDC3Q9HBV1 291 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 CD300AQ9UGN4 299 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 PCDHGB4Q9UN71 923 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 GABRQQ9UN88 632 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 PCDHGB5Q9Y5G0 923 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 SQORQ9Y6N5 450 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 A0A0J9YYE9 177 aa18.3■□□□□ 0.52
SYNE4-204ENST00000465425 UBA6A0AVT1 1052 aaPredicted RBP18.3■□□□□ 0.52
SYNE4-204ENST00000465425 BBIP1A8MTZ0 92 aa18.3■□□□□ 0.52
SYNE4-204ENST00000465425 SYN3O14994 580 aa18.3■□□□□ 0.52
SYNE4-204ENST00000465425 MUSKO15146 869 aa18.3■□□□□ 0.52
SYNE4-204ENST00000465425 ALDOCP09972 364 aaKnown RBP18.3■□□□□ 0.52
SYNE4-204ENST00000465425 PSMC3P17980 439 aa18.3■□□□□ 0.52
SYNE4-204ENST00000465425 CLCN2P51788 898 aa18.3■□□□□ 0.52
SYNE4-204ENST00000465425 NKX3-2P78367 333 aa18.3■□□□□ 0.52
SYNE4-204ENST00000465425 UGT3A2Q3SY77 523 aa18.3■□□□□ 0.52
SYNE4-204ENST00000465425 FAM26DQ5JW98 314 aa18.3■□□□□ 0.52
SYNE4-204ENST00000465425 DHFR2Q86XF0 187 aa18.3■□□□□ 0.52
SYNE4-204ENST00000465425 HERC6Q8IVU3 1022 aa18.3■□□□□ 0.52
SYNE4-204ENST00000465425 BBS5Q8N3I7 341 aa18.3■□□□□ 0.52
SYNE4-204ENST00000465425 RHEBL1Q8TAI7 183 aa18.3■□□□□ 0.52
SYNE4-204ENST00000465425 TWIST2Q8WVJ9 160 aa18.3■□□□□ 0.52
SYNE4-204ENST00000465425 SLC39A3Q9BRY0 314 aa18.3■□□□□ 0.52
SYNE4-204ENST00000465425 IL37Q9NZH6 218 aa18.3■□□□□ 0.52
SYNE4-204ENST00000465425 FAM92AA1XBS5 289 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 AZIN1O14977 448 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 CDK14O94921 469 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 ATP6V1B1P15313 513 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 OGNP20774 298 aaKnown RBP18.29■□□□□ 0.52
SYNE4-204ENST00000465425 SLC7A1P30825 629 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 FLT3LGP49771 235 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 STC1P52823 247 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 FCGRTP55899 365 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 NME5P56597 212 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 GK3PQ14409 553 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 SEMA3AQ14563 771 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 AP1ARQ63HQ0 302 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 PRICKLE1Q96MT3 831 aaPredicted RBP18.29■□□□□ 0.52
SYNE4-204ENST00000465425 SEPT5Q99719 369 aaPredicted RBP18.29■□□□□ 0.52
SYNE4-204ENST00000465425 CCDC68Q9H2F9 335 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 ZNF696Q9H7X3 374 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 PLK2Q9NYY3 685 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 SLC27A5Q9Y2P5 690 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 NR5A2O00482 541 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 PIP5K1BO14986 540 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 FGF4P08620 206 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 ZNF26P17031 533 aaPredicted RBP18.29■□□□□ 0.52
SYNE4-204ENST00000465425 GPX3P22352 226 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 SUOXP51687 545 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 INHBEP58166 350 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 MYBPC1Q00872 1141 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 BTG3Q14201 252 aaPredicted RBP18.29■□□□□ 0.52
SYNE4-204ENST00000465425 OR4D1Q15615 310 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 FAM171A1Q5VUB5 890 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 EP400NLQ6ZTU2 488 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 RTN4RL1Q86UN2 441 aaPredicted RBP18.29■□□□□ 0.52
SYNE4-204ENST00000465425 FUNDC1Q8IVP5 155 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 MIER2Q8N344 545 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 DGCR14Q96DF8 476 aaKnown RBP18.29■□□□□ 0.52
SYNE4-204ENST00000465425 AARSD1Q9BTE6 412 aaKnown RBP18.29■□□□□ 0.52
SYNE4-204ENST00000465425 ARHGAP39Q9C0H5 1083 aa18.29■□□□□ 0.52
SYNE4-204ENST00000465425 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.29■□□□□ 0.52
SYNE4-204ENST00000465425 PLXNA3P51805 1871 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 TCRBV3S1A0A5B6 114 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 F5H5T6 163 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 OR6B1O95007 311 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 TFAP2AP05549 437 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 FGFR3P22607 806 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 TIAL1Q01085 375 aaKnown RBP eCLIP18.28■□□□□ 0.52
SYNE4-204ENST00000465425 TRIM71Q2Q1W2 868 aaKnown RBP18.28■□□□□ 0.52
SYNE4-204ENST00000465425 C6orf10Q5SRN2 563 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 IL31Q6EBC2 164 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 KLHDC9Q8NEP7 349 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 TRPC4APQ8TEL6 797 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 TFB2MQ9H5Q4 396 aaKnown RBP18.28■□□□□ 0.52
SYNE4-204ENST00000465425 COQ10BQ9H8M1 238 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 SYTL2Q9HCH5 934 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 RNF112Q9ULX5 631 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 AK5Q9Y6K8 562 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms