RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 FIBPO43427 364 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 SERPINI2O75830 405 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 OR2C1O95371 312 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 CENPBP07199 599 aaPredicted RBP4.2□□□□□ -1.74
CLK1-208ENST00000464454 ACAA1P09110 424 aaPredicted RBP4.2□□□□□ -1.74
CLK1-208ENST00000464454 CSH1P0DML2 217 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 CSH2P0DML3 217 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 PORP16435 677 aaPredicted RBP4.2□□□□□ -1.74
CLK1-208ENST00000464454 IL7RP16871 459 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 TMEM11P17152 192 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 GPTP24298 496 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 MCM3P25205 808 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 NLRP5P59047 1200 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 SORDQ00796 357 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 NAE1Q13564 534 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 CTTNQ14247 550 aaKnown RBP4.2□□□□□ -1.74
CLK1-208ENST00000464454 MYBPC2Q14324 1141 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 ZSCAN23Q3MJ62 389 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 PLEKHS1Q5SXH7 462 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 GKAP1Q5VSY0 366 aaPredicted RBP4.2□□□□□ -1.74
CLK1-208ENST00000464454 PLEKHA7Q6IQ23 1121 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 KIAA1161Q6NSJ0 714 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 C16orf54Q6UWD8 224 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 GLDNQ6ZMI3 551 aaPredicted RBP4.2□□□□□ -1.74
CLK1-208ENST00000464454 CHST9Q7L1S5 443 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 HAPLN4Q86UW8 402 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 ADHFE1Q8IWW8 467 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 SLC35F3Q8IY50 421 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 TEX11Q8IYF3 940 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 TAGAPQ8N103 731 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 SRBD1Q8N5C6 995 aaKnown RBP4.2□□□□□ -1.74
CLK1-208ENST00000464454 GPT2Q8TD30 523 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 ADAMTS14Q8WXS8 1223 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 TRIB2Q92519 343 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 NEUROG1Q92886 237 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 MED30Q96HR3 178 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 PGAM5Q96HS1 289 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 TXNDC15Q96J42 360 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 HARBI1Q96MB7 349 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 TMEM47Q9BQJ4 181 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 MAK16Q9BXY0 300 aaKnown RBP4.2□□□□□ -1.74
CLK1-208ENST00000464454 PDZD7Q9H5P4 517 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 RANGRFQ9HD47 186 aaPredicted RBP4.2□□□□□ -1.74
CLK1-208ENST00000464454 CISD1Q9NZ45 108 aaKnown RBP4.2□□□□□ -1.74
CLK1-208ENST00000464454 AGO1Q9UL18 857 aaKnown RBP4.2□□□□□ -1.74
CLK1-208ENST00000464454 ERVK-11Q9UQG0 969 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 TMEM5Q9Y2B1 443 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 TTLL3Q9Y4R7 772 aa4.2□□□□□ -1.74
CLK1-208ENST00000464454 TMEM202A6NGA9 273 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 HCRTR2O43614 444 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 KCNJ13O60928 360 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 CLTBP09497 229 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 TGFB3P10600 412 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 ACTN2P35609 894 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 RPL3P39023 403 aaKnown RBP4.19□□□□□ -1.74
CLK1-208ENST00000464454 GARSP41250 739 aaKnown RBP4.19□□□□□ -1.74
CLK1-208ENST00000464454 PIK3CAP42336 1068 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 TFAP4Q01664 338 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 EPS8Q12929 822 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 PLCB4Q15147 1175 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 NAB2Q15742 525 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 ADIPOQQ15848 244 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 CFAP58Q5T655 872 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 JADE1Q6IE81 842 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 QSOX2Q6ZRP7 698 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 SZRD1Q7Z422 152 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 FJX1Q86VR8 437 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 C17orf53Q8N3J3 647 aaPredicted RBP4.19□□□□□ -1.74
CLK1-208ENST00000464454 AGBL3Q8NEM8 1001 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 SNRNP27Q8WVK2 155 aaKnown RBP4.19□□□□□ -1.74
CLK1-208ENST00000464454 ZKSCAN4Q969J2 545 aaPredicted RBP4.19□□□□□ -1.74
CLK1-208ENST00000464454 FEM1CQ96JP0 617 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 SLC25A33Q9BSK2 321 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 C1QTNF5Q9BXJ0 243 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 IFIH1Q9BYX4 1025 aaKnown RBP4.19□□□□□ -1.74
CLK1-208ENST00000464454 TM6SF1Q9BZW5 370 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 CD93Q9NPY3 652 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 DDX4Q9NQI0 724 aaKnown RBP4.19□□□□□ -1.74
CLK1-208ENST00000464454 OR6C3Q9NZP0 311 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 MAU2Q9Y6X3 613 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 CKAP5Q14008 2032 aa4.19□□□□□ -1.74
CLK1-208ENST00000464454 EVPLQ92817 2033 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 CLEC18AA5D8T8 446 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 BTBD18B2RXH4 712 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 WNT9BO14905 357 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 AHCYL1O43865 530 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 VNN2O95498 520 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 RB1P06400 928 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 FCGR1AP12314 374 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 HOXB6P17509 224 aaKnown RBP4.18□□□□□ -1.74
CLK1-208ENST00000464454 RAD52P43351 418 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 MXI1P50539 228 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 RAD23BP54727 409 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 GALCP54803 685 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 SEC61A1P61619 476 aaKnown RBP4.18□□□□□ -1.74
CLK1-208ENST00000464454 ZBED6P86452 979 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 NUCB1Q02818 461 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 C2orf68Q2NKX9 166 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 RAB41Q5JT25 222 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 TYW3Q6IPR3 259 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms