RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-210	ENST00000464313	SPATA6L	Q8N4H0	392 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	TTC39C	Q8N584	583 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	NEUROG1	Q92886	237 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	ARHGEF26	Q96DR7	871 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	MARK4	Q96L34	752 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	LRFN5	Q96NI6	719 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	SDF4	Q9BRK5	362 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	IFIH1	Q9BYX4	1025 aa	Known RBP	4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	CNGB3	Q9NQW8	809 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	HCFC1R1	Q9NWW0	138 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	OCIAD1	Q9NX40	245 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	TINAG	Q9UJW2	476 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	IGLV5-52	A0A0A0MRZ9	124 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313		H3BQ06	376 aa	Predicted RBP	4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	SOCS6	O14544	535 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	NGFR	P08138	427 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	PLA2G2A	P14555	144 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	MAOA	P21397	527 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	GARS	P41250	739 aa	Known RBP	4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	METAP2	P50579	478 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	GALC	P54803	685 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	NIPAL4	Q0D2K0	466 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	PLCB4	Q15147	1175 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	XKR9	Q5GH70	373 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	FAM69B	Q5VUD6	431 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	SLC36A4	Q6YBV0	504 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	DPPA4	Q7L190	304 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	TAOK1	Q7L7X3	1001 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	DSEL	Q8IZU8	1212 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	SCFD2	Q8WU76	684 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	RRNAD1	Q96FB5	475 aa	Known RBP	4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	CMTM3	Q96MX0	182 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	PCGF1	Q9BSM1	259 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	SPRY4	Q9C004	299 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	GHITM	Q9H3K2	345 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	MMP25	Q9NPA2	562 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	TBC1D29	Q9UFV1	150 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	LYVE1	Q9Y5Y7	322 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	MAU2	Q9Y6X3	613 aa		4.11	□□□□□ -1.75
PTPN12-210	ENST00000464313	FRMD3	A2A2Y4	597 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	CLEC18A	A5D8T8	446 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	PTGES3L	E9PB15	166 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	GTPBP1	O00178	669 aa	Known RBP	4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	PLRG1	O43660	514 aa	Known RBP	4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	KCNJ13	O60928	360 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	GJB3	O75712	270 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	SLC25A12	O75746	678 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	GFPT2	O94808	682 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	OR2C1	O95371	312 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	PRSS2	P07478	247 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	ZNF12	P17014	697 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	STX2	P32856	288 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	UBA7	P41226	1012 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	THBS3	P49746	956 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	DSC1	Q08554	894 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	MEA1	Q16626	185 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	SETMAR	Q53H47	684 aa	Predicted RBP	4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	LRIF1	Q5T3J3	769 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	KIAA0930	Q6ICG6	404 aa	Predicted RBP	4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	PLEKHA7	Q6IQ23	1121 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	MZT2B	Q6NZ67	158 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	WDR73	Q6P4I2	378 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	SEPT14	Q6ZU15	432 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	CLIP4	Q8N3C7	705 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	PGBD5	Q8N414	524 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	CLEC18C	Q8NCF0	446 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	OR2AK2	Q8NG84	335 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	ELMOD3	Q96FG2	381 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	TMEM68	Q96MH6	324 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	TIGD1	Q96MW7	591 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	ACOX2	Q99424	681 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	TREX2	Q9BQ50	279 aa	Predicted RBP	4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	KXD1	Q9BQD3	176 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	NTPCR	Q9BSD7	190 aa	Known RBP	4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	PDZD7	Q9H5P4	517 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	SH2D4A	Q9H788	454 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	KAT14	Q9H8E8	782 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	SEBOX	Q9HB31	216 aa	Predicted RBP	4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	HAUS2	Q9NVX0	235 aa		4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	R3HDM2	Q9Y2K5	976 aa	Known RBP	4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313	LAS1L	Q9Y4W2	734 aa	Known RBP	4.1	□□□□□ -1.75
PTPN12-210	ENST00000464313		A0A0U1RQJ8	604 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	ANKRD18B	A2A2Z9	1011 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	CPED1	A4D0V7	1026 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	SERINC4	A6NH21	518 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313		A8MZ25	164 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	MYO1G	B0I1T2	1018 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	SMAD6	O43541	496 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	NDUFS3	O75489	264 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	GLUD1	P00367	558 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	EGF	P01133	1207 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	AFP	P02771	609 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	CLTB	P09497	229 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	CDH2	P19022	906 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	MCM3	P25205	808 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	PIK3CA	P42336	1068 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	CASP2	P42575	452 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	GLUD2	P49448	558 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	ASTE1	Q2TB18	679 aa	Predicted RBP	4.09	□□□□□ -1.75

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