RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 CLIP4Q8N3C7 705 aa4.3□□□□□ -1.72
USP9X-204ENST00000463829 WDTC1Q8N5D0 677 aa4.3□□□□□ -1.72
USP9X-204ENST00000463829 OR14L1PQ8NHC6 308 aa4.3□□□□□ -1.72
USP9X-204ENST00000463829 ELP5Q8TE02 316 aa4.3□□□□□ -1.72
USP9X-204ENST00000463829 WASF1Q92558 559 aa4.3□□□□□ -1.72
USP9X-204ENST00000463829 PHF21BQ96EK2 531 aa4.3□□□□□ -1.72
USP9X-204ENST00000463829 C1orf74Q96LT6 269 aa4.3□□□□□ -1.72
USP9X-204ENST00000463829 SDF4Q9BRK5 362 aa4.3□□□□□ -1.72
USP9X-204ENST00000463829 TMEM204Q9BSN7 226 aa4.3□□□□□ -1.72
USP9X-204ENST00000463829 HAUS8Q9BT25 410 aa4.3□□□□□ -1.72
USP9X-204ENST00000463829 SEZ6LQ9BYH1 1024 aa4.3□□□□□ -1.72
USP9X-204ENST00000463829 FTOQ9C0B1 505 aaKnown RBP eCLIP4.3□□□□□ -1.72
USP9X-204ENST00000463829 SYNCQ9H7C4 482 aa4.3□□□□□ -1.72
USP9X-204ENST00000463829 PPP1R3EQ9H7J1 279 aa4.3□□□□□ -1.72
USP9X-204ENST00000463829 CNGB3Q9NQW8 809 aa4.3□□□□□ -1.72
USP9X-204ENST00000463829 FBXO2Q9UK22 296 aaPredicted RBP4.3□□□□□ -1.72
USP9X-204ENST00000463829 hDV102S1A0JD36 115 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 FRMD3A2A2Y4 597 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 CPED1A4D0V7 1026 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 LINC01553A4QN01 128 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 CLEC18AA5D8T8 446 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 A6NCN8 305 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 HCRTR2O43614 444 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 JRKO75564 520 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 GAGE7O76087 117 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 ACAA1P09110 424 aaPredicted RBP4.29□□□□□ -1.72
USP9X-204ENST00000463829 GAGE12FP0CL80 117 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 GAGE12GP0CL81 117 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 GAGE12IP0CL82 117 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 PIK3CAP42336 1068 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 HTR6P50406 440 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 FOXG1P55316 489 aaPredicted RBP4.29□□□□□ -1.72
USP9X-204ENST00000463829 ZBED6P86452 979 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 ECT2LQ008S8 904 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 TFAP4Q01664 338 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 GRIK2Q13002 908 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 GAGE1Q13065 139 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 GAGE4Q13068 117 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 NAB2Q15742 525 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 EIF2S3LQ2VIR3 472 aaKnown RBP4.29□□□□□ -1.72
USP9X-204ENST00000463829 ZSCAN23Q3MJ62 389 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 AMZ1Q400G9 498 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 FAM205BPQ63HN1 556 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 FASTKD5Q7L8L6 764 aaKnown RBP4.29□□□□□ -1.72
USP9X-204ENST00000463829 CACNA2D4Q7Z3S7 1137 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 PCGF5Q86SE9 256 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 TICAM1Q8IUC6 712 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 RNF168Q8IYW5 571 aaPredicted RBP4.29□□□□□ -1.72
USP9X-204ENST00000463829 CLEC18CQ8NCF0 446 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 IGSF8Q969P0 613 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 RRNAD1Q96FB5 475 aaKnown RBP4.29□□□□□ -1.72
USP9X-204ENST00000463829 PPP1R13BQ96KQ4 1090 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 LYZL4Q96KX0 146 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 ACOX2Q99424 681 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 SEPT5Q99719 369 aaPredicted RBP4.29□□□□□ -1.72
USP9X-204ENST00000463829 PCGF1Q9BSM1 259 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 KCNN2Q9H2S1 579 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 GHITMQ9H3K2 345 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 SMARCAD1Q9H4L7 1026 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 C17orf75Q9HAS0 396 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 SLC28A3Q9HAS3 691 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 HAUS2Q9NVX0 235 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 SLC9A2Q9UBY0 812 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 SESN1Q9Y6P5 492 aa4.29□□□□□ -1.72
USP9X-204ENST00000463829 TRIP12Q14669 1992 aaPredicted RBP4.29□□□□□ -1.72
USP9X-204ENST00000463829 RSF1Q96T23 1441 aaPredicted RBP4.29□□□□□ -1.72
USP9X-204ENST00000463829 IGLV5-52A0A0A0MRZ9 124 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 VCYO14598 125 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 VILLO15195 856 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 KCNAB3O43448 404 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 NDUFS7O75251 213 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 OR2C1O95371 312 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 TMEM11P17152 192 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 ALOX12P18054 663 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 RRM1P23921 792 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 HOXC9P31274 260 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 HOXD13P35453 343 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 UBA7P41226 1012 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 PEX5P50542 639 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 GALCP54803 685 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 BNC1Q01954 994 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 LTBQ06643 244 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 TRAF3Q13114 568 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 PRKG2Q13237 762 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 PDE1CQ14123 709 aaPredicted RBP4.28□□□□□ -1.72
USP9X-204ENST00000463829 MEA1Q16626 185 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 CDONQ4KMG0 1287 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 SOWAHCQ53LP3 525 aaPredicted RBP4.28□□□□□ -1.72
USP9X-204ENST00000463829 FAM69BQ5VUD6 431 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 JADE1Q6IE81 842 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 CFAP161Q6P656 301 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 SLC36A4Q6YBV0 504 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 SEPT14Q6ZU15 432 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 DPPA4Q7L190 304 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 CHST9Q7L1S5 443 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 TEX11Q8IYF3 940 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 ADGRF2Q8IZF7 708 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 WFIKKN2Q8TEU8 576 aa4.28□□□□□ -1.72
USP9X-204ENST00000463829 ZKSCAN4Q969J2 545 aaPredicted RBP4.28□□□□□ -1.72
USP9X-204ENST00000463829 MTBPQ96DY7 904 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms