RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 KELP23276 732 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 CTSKP43235 329 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 PFN3P60673 137 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 DPTQ07507 201 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 INPP5AQ14642 412 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 PTPRRQ15256 657 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 PPP1R7Q15435 360 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 KCTD11Q693B1 232 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 RAET1GQ6H3X3 334 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 TTC27Q6P3X3 843 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 PPP1R21Q6ZMI0 780 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 CBARPQ8N350 705 aaPredicted RBP19.77■□□□□ 0.76
COL9A3-204ENST00000463487 MINDY1Q8N5J2 469 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 NETO1Q8TDF5 533 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 AP2M1Q96CW1 435 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 BMFQ96LC9 184 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 APOL2Q9BQE5 337 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 GAREM1Q9H706 876 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 ERVMER34-1Q9H9K5 563 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 ARNT2Q9HBZ2 717 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 EIF2B3Q9NR50 452 aaKnown RBP19.77■□□□□ 0.76
COL9A3-204ENST00000463487 MBNL1Q9NR56 388 aaKnown RBP19.77■□□□□ 0.76
COL9A3-204ENST00000463487 PKP3Q9Y446 797 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 CACNA1EQ15878 2313 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 USP34Q70CQ2 3546 aa19.77■□□□□ 0.75
COL9A3-204ENST00000463487 LRRK1Q38SD2 2015 aa19.76■□□□□ 0.75
COL9A3-204ENST00000463487 DOCK9Q9BZ29 2069 aa19.76■□□□□ 0.75
COL9A3-204ENST00000463487 GOLGA8CPA6NN73 597 aa19.76■□□□□ 0.75
COL9A3-204ENST00000463487 CACNB4O00305 520 aaPredicted RBP19.76■□□□□ 0.75
COL9A3-204ENST00000463487 PPFIA2O75334 1257 aa19.76■□□□□ 0.75
COL9A3-204ENST00000463487 KRT14P02533 472 aa19.76■□□□□ 0.75
COL9A3-204ENST00000463487 ZSCAN5DPP0CG00 497 aa19.76■□□□□ 0.75
COL9A3-204ENST00000463487 ETS1P14921 441 aa19.76■□□□□ 0.75
COL9A3-204ENST00000463487 SPINT3P49223 89 aa19.76■□□□□ 0.75
COL9A3-204ENST00000463487 LIMK1P53667 647 aa19.76■□□□□ 0.75
COL9A3-204ENST00000463487 CDK16Q00536 496 aa19.76■□□□□ 0.75
COL9A3-204ENST00000463487 PDE1CQ14123 709 aaPredicted RBP19.76■□□□□ 0.75
COL9A3-204ENST00000463487 PNCKQ6P2M8 343 aa19.76■□□□□ 0.75
COL9A3-204ENST00000463487 TMC3Q7Z5M5 1100 aa19.76■□□□□ 0.75
COL9A3-204ENST00000463487 TECPR1Q7Z6L1 1165 aa19.76■□□□□ 0.75
COL9A3-204ENST00000463487 NLRP8Q86W28 1048 aa19.76■□□□□ 0.75
COL9A3-204ENST00000463487 DNAAF3Q8N9W5 541 aa19.76■□□□□ 0.75
COL9A3-204ENST00000463487 SMIM14Q96QK8 99 aa19.76■□□□□ 0.75
COL9A3-204ENST00000463487 FAM83DQ9H4H8 585 aa19.76■□□□□ 0.75
COL9A3-204ENST00000463487 WDR26Q9H7D7 661 aa19.76■□□□□ 0.75
COL9A3-204ENST00000463487 FSCN3Q9NQT6 498 aa19.76■□□□□ 0.75
COL9A3-204ENST00000463487 PHPT1Q9NRX4 125 aaPredicted RBP19.76■□□□□ 0.75
COL9A3-204ENST00000463487 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.76■□□□□ 0.75
COL9A3-204ENST00000463487 DMDP11532 3685 aa19.75■□□□□ 0.75
COL9A3-204ENST00000463487 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.75■□□□□ 0.75
COL9A3-204ENST00000463487 USP12O75317 370 aa19.75■□□□□ 0.75
COL9A3-204ENST00000463487 TEAD1P28347 426 aa19.75■□□□□ 0.75
COL9A3-204ENST00000463487 HMGCLP35914 325 aa19.75■□□□□ 0.75
COL9A3-204ENST00000463487 GPR1P46091 355 aa19.75■□□□□ 0.75
COL9A3-204ENST00000463487 DCDC1P59894 354 aa19.75■□□□□ 0.75
COL9A3-204ENST00000463487 SARNPP82979 210 aaKnown RBP19.75■□□□□ 0.75
COL9A3-204ENST00000463487 CKAP4Q07065 602 aaKnown RBP19.75■□□□□ 0.75
COL9A3-204ENST00000463487 CDH17Q12864 832 aa19.75■□□□□ 0.75
COL9A3-204ENST00000463487 GPS1Q13098 491 aa19.75■□□□□ 0.75
COL9A3-204ENST00000463487 LAMB3Q13751 1172 aa19.75■□□□□ 0.75
COL9A3-204ENST00000463487 SPARCL1Q14515 664 aa19.75■□□□□ 0.75
COL9A3-204ENST00000463487 TAF1AQ15573 450 aaPredicted RBP19.75■□□□□ 0.75
COL9A3-204ENST00000463487 CDKN3Q16667 212 aa19.75■□□□□ 0.75
COL9A3-204ENST00000463487 HLA-BQ31612 363 aa19.75■□□□□ 0.75
COL9A3-204ENST00000463487 SYDE1Q6ZW31 735 aaPredicted RBP19.75■□□□□ 0.75
COL9A3-204ENST00000463487 PARGQ86W56 976 aa19.75■□□□□ 0.75
COL9A3-204ENST00000463487 BRSK1Q8TDC3 778 aa19.75■□□□□ 0.75
COL9A3-204ENST00000463487 ELF4Q99607 663 aaPredicted RBP19.75■□□□□ 0.75
COL9A3-204ENST00000463487 APOOQ9BUR5 198 aa19.75■□□□□ 0.75
COL9A3-204ENST00000463487 ABCG8Q9H221 673 aa19.75■□□□□ 0.75
COL9A3-204ENST00000463487 DNAAF2Q9NVR5 837 aaKnown RBP19.75■□□□□ 0.75
COL9A3-204ENST00000463487 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.75■□□□□ 0.75
COL9A3-204ENST00000463487 PCYOX1Q9UHG3 505 aa19.75■□□□□ 0.75
COL9A3-204ENST00000463487 CDV3Q9UKY7 258 aaKnown RBP19.75■□□□□ 0.75
COL9A3-204ENST00000463487 PCDH15Q96QU1 1955 aa19.75■□□□□ 0.75
COL9A3-204ENST00000463487 PTPRZ1P23471 2315 aaPredicted RBP19.74■□□□□ 0.75
COL9A3-204ENST00000463487 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.74■□□□□ 0.75
COL9A3-204ENST00000463487 SPTY2D1-AS1A0A0U1RR47 76 aa19.74■□□□□ 0.75
COL9A3-204ENST00000463487 H3BM21 787 aa19.74■□□□□ 0.75
COL9A3-204ENST00000463487 FANCGO15287 622 aa19.74■□□□□ 0.75
COL9A3-204ENST00000463487 SUN1O94901 812 aa19.74■□□□□ 0.75
COL9A3-204ENST00000463487 ZNF883P0CG24 379 aa19.74■□□□□ 0.75
COL9A3-204ENST00000463487 GM2AP17900 193 aa19.74■□□□□ 0.75
COL9A3-204ENST00000463487 VPS41P49754 854 aa19.74■□□□□ 0.75
COL9A3-204ENST00000463487 CCT8P50990 548 aa19.74■□□□□ 0.75
COL9A3-204ENST00000463487 SLC14A1Q13336 389 aa19.74■□□□□ 0.75
COL9A3-204ENST00000463487 SUZ12Q15022 739 aaKnown RBP19.74■□□□□ 0.75
COL9A3-204ENST00000463487 ZNF423Q2M1K9 1284 aa19.74■□□□□ 0.75
COL9A3-204ENST00000463487 INAVAQ3KP66 663 aa19.74■□□□□ 0.75
COL9A3-204ENST00000463487 MACC1Q6ZN28 852 aa19.74■□□□□ 0.75
COL9A3-204ENST00000463487 PRUNE1Q86TP1 453 aa19.74■□□□□ 0.75
COL9A3-204ENST00000463487 GLIS1Q8NBF1 620 aa19.74■□□□□ 0.75
COL9A3-204ENST00000463487 ZNF592Q92610 1267 aa19.74■□□□□ 0.75
COL9A3-204ENST00000463487 SLCO2A1Q92959 643 aa19.74■□□□□ 0.75
COL9A3-204ENST00000463487 DDX47Q9H0S4 455 aaKnown RBP19.74■□□□□ 0.75
COL9A3-204ENST00000463487 GPR27Q9NS67 375 aa19.74■□□□□ 0.75
COL9A3-204ENST00000463487 NFKBIL1Q9UBC1 381 aaPredicted RBP19.74■□□□□ 0.75
COL9A3-204ENST00000463487 CD84Q9UIB8 345 aa19.74■□□□□ 0.75
COL9A3-204ENST00000463487 SPO11Q9Y5K1 396 aa19.74■□□□□ 0.75
COL9A3-204ENST00000463487 PIEZO1Q92508 2521 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms