RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-208	ENST00000461578	TTC24	A2A3L6	582 aa	Predicted RBP	13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	WASH4P	A8MWX3	477 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	PES1	O00541	588 aa	Known RBP	13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	PALM	O75781	387 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	STK17B	O94768	372 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	KRT3	P12035	628 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	PRKCSH	P14314	528 aa	Predicted RBP	13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	GPD1	P21695	349 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	GNLY	P22749	145 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	MMP8	P22894	467 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	ERCC5	P28715	1186 aa	Predicted RBP	13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	RFC1	P35251	1148 aa	Predicted RBP	13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	CDK3	Q00526	305 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	MC2R	Q01718	297 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	MC1R	Q01726	317 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	ABHD18	Q0P651	414 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	TPD52L1	Q16890	204 aa	Predicted RBP	13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	HSP90AA4P	Q58FG1	418 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	KLHDC7A	Q5VTJ3	777 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	CEACAM20	Q6UY09	585 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	OR10G6	Q8NH81	332 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	ECHDC3	Q96DC8	303 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	NSMCE3	Q96MG7	304 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	SLC38A3	Q99624	504 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	SELENOO	Q9BVL4	669 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	CINP	Q9BW66	212 aa	Predicted RBP	13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	TEX101	Q9BY14	249 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	NDST4	Q9H3R1	872 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	LRRC19	Q9H756	370 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	KLHL3	Q9UH77	587 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578	KCNMB2	Q9Y691	235 aa		13.72	□□□□□ -0.21
PABPC4-208	ENST00000461578		A1L4Q6	167 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578		F8VZ95	297 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	MKRN2OS	H3BPM6	223 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	CCP110	O43303	1012 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	VPS4B	O75351	444 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	GFPT2	O94808	682 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	CYP1A1	P04798	512 aa	Predicted RBP	13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	ETV3	P41162	512 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	MAPK9	P45984	424 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	CSNK1D	P48730	415 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	PAPOLA	P51003	745 aa	Known RBP	13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	SCNN1B	P51168	640 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	COPB1	P53618	953 aa	Known RBP	13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	TPI1	P60174	286 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	POLR2L	P62875	67 aa	Known RBP	13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	GPLD1	P80108	840 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	SQSTM1	Q13501	440 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	CNGA3	Q16281	694 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	VWA3B	Q502W6	1294 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	FHL5	Q5TD97	284 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	RAET1G	Q6H3X3	334 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	WDR59	Q6PJI9	974 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	ASB18	Q6ZVZ8	466 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	FNIP1	Q8TF40	1166 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	PDCD6IP	Q8WUM4	868 aa	Known RBP	13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	SLC39A8	Q9C0K1	460 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	NOCT	Q9UK39	431 aa	Known RBP	13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	FZD10	Q9ULW2	581 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	VPS4A	Q9UN37	437 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	KCTD3	Q9Y597	815 aa		13.71	□□□□□ -0.21
PABPC4-208	ENST00000461578	UNC79	Q9P2D8	2635 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	ARHGAP42	A6NI28	874 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	ENO4	A6NNW6	628 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	TRAFD1	O14545	582 aa	Predicted RBP	13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	FGF10	O15520	208 aa	Predicted RBP	13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	MAP3K6	O95382	1288 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	UCHL3	P15374	230 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	F8A1	P23610	371 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	MAN1A1	P33908	653 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	STAT5A	P42229	794 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	NOP2	P46087	812 aa	Known RBP	13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	FMO1	Q01740	532 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	PEX6	Q13608	980 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	ERV3-1	Q14264	604 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	MIIP	Q5JXC2	388 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	CAPRIN2	Q6IMN6	1127 aa	Known RBP	13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	ARHGAP36	Q6ZRI8	547 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	MARK2	Q7KZI7	788 aa	Known RBP	13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	ARHGAP22	Q7Z5H3	698 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	HSD11B1L	Q7Z5J1	315 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	CCDC13	Q8IYE1	715 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	EFCAB3	Q8N7B9	438 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	SLC37A2	Q8TED4	501 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	NCSTN	Q92542	709 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	OR2M4	Q96R27	311 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	NAA15	Q9BXJ9	866 aa	Known RBP	13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	TRIT1	Q9H3H1	467 aa	Known RBP	13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	SP110	Q9HB58	689 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	PRDM8	Q9NQV8	689 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	GPATCH2L	Q9NWQ4	482 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	SLC17A4	Q9Y2C5	497 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	TMEM98	Q9Y2Y6	226 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	TMEM184B	Q9Y519	407 aa	Predicted RBP	13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	PCDHB3	Q9Y5E6	796 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	RPS6KL1	Q9Y6S9	549 aa		13.7	□□□□□ -0.22
PABPC4-208	ENST00000461578	CREBBP	Q92793	2442 aa		13.69	□□□□□ -0.22
PABPC4-208	ENST00000461578	TTLL8	A6PVC2	850 aa		13.69	□□□□□ -0.22
PABPC4-208	ENST00000461578	DFFA	O00273	331 aa		13.69	□□□□□ -0.22
PABPC4-208	ENST00000461578	HEXIM1	O94992	359 aa	Known RBP	13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms