RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 MMP25Q9NPA2 562 aa3.46□□□□□ -1.86
RFC4-211ENST00000460408 LTB4R2Q9NPC1 389 aa3.46□□□□□ -1.86
RFC4-211ENST00000460408 RRP7BPQ9NSQ0 103 aa3.46□□□□□ -1.86
RFC4-211ENST00000460408 ADD3Q9UEY8 706 aaKnown RBP3.46□□□□□ -1.86
RFC4-211ENST00000460408 A0A1B0GVM2 712 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 A0A1B0GVT2 93 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 CLEC18AA5D8T8 446 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 FAM90A10PA6NDY2 464 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 HSPA12AO43301 675 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 ITM2AO43736 263 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 HNRNPCL1O60812 293 aaKnown RBP3.45□□□□□ -1.86
RFC4-211ENST00000460408 NDUFS3O75489 264 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 SLC25A12O75746 678 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 VNN2O95498 520 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 CSH1P0DML2 217 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 CSH2P0DML3 217 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 MCM3P25205 808 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 HOXA13P31271 388 aaPredicted RBP3.45□□□□□ -1.86
RFC4-211ENST00000460408 HNRNPH1P31943 449 aaKnown RBP3.45□□□□□ -1.86
RFC4-211ENST00000460408 ARRB2P32121 409 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 EIF2S3P41091 472 aaKnown RBP3.45□□□□□ -1.86
RFC4-211ENST00000460408 MXI1P50539 228 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 METAP2P50579 478 aaKnown RBP eCLIP3.45□□□□□ -1.86
RFC4-211ENST00000460408 NUDT6P53370 316 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 RAD23BP54727 409 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 CRYMQ14894 314 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 PLEKHS1Q5SXH7 462 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 KIAA0930Q6ICG6 404 aaPredicted RBP3.45□□□□□ -1.86
RFC4-211ENST00000460408 PQLC2Q6ZP29 291 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 CFAP77Q6ZQR2 320 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 CLEC17AQ6ZS10 378 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 DPPA4Q7L190 304 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 SHFQ7M4L6 423 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 TSPAN33Q86UF1 283 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 FOXRED2Q8IWF2 684 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 SRBD1Q8N5C6 995 aaKnown RBP3.45□□□□□ -1.86
RFC4-211ENST00000460408 PRR26Q8N8Z3 221 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 CLEC18CQ8NCF0 446 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 OR14L1PQ8NHC6 308 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 ADAMTS14Q8WXS8 1223 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 ZKSCAN4Q969J2 545 aaPredicted RBP3.45□□□□□ -1.86
RFC4-211ENST00000460408 RRNAD1Q96FB5 475 aaKnown RBP3.45□□□□□ -1.86
RFC4-211ENST00000460408 PGAM5Q96HS1 289 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 ZNF570Q96NI8 536 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 OR2A14Q96R47 310 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 SEPT5Q99719 369 aaPredicted RBP3.45□□□□□ -1.86
RFC4-211ENST00000460408 IFIH1Q9BYX4 1025 aaKnown RBP3.45□□□□□ -1.86
RFC4-211ENST00000460408 FTOQ9C0B1 505 aaKnown RBP eCLIP3.45□□□□□ -1.86
RFC4-211ENST00000460408 RBM38Q9H0Z9 239 aaKnown RBP3.45□□□□□ -1.86
RFC4-211ENST00000460408 TMX4Q9H1E5 349 aaPredicted RBP3.45□□□□□ -1.86
RFC4-211ENST00000460408 SH2D4AQ9H788 454 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 PPP1R3EQ9H7J1 279 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 FZD10Q9ULW2 581 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 ERVK-11Q9UQG0 969 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 MTMR6Q9Y217 621 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 INSL5Q9Y5Q6 135 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 PTGDR2Q9Y5Y4 395 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 MAU2Q9Y6X3 613 aa3.45□□□□□ -1.86
RFC4-211ENST00000460408 ERCC6L2Q5T890 1561 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 DISP3Q9P2K9 1392 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 hCG_1807616A0A1W2PRN6 198 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 DYTNA2CJ06 578 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 CPED1A4D0V7 1026 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 OR6C75A6NL08 312 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 H3BNX3 289 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 VCYO14598 125 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 ASAP2O43150 1006 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 DDX5P17844 614 aaKnown RBP3.44□□□□□ -1.86
RFC4-211ENST00000460408 ACADLP28330 430 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 ACTN2P35609 894 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 AMTP48728 403 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 THBS3P49746 956 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 PGGT1BP53609 377 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 ZBED6P86452 979 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 EPS8Q12929 822 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 NEDD9Q14511 834 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 WTAPQ15007 396 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 TOMM20Q15388 145 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 ADIPOQQ15848 244 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 EIF2S3LQ2VIR3 472 aaKnown RBP3.44□□□□□ -1.86
RFC4-211ENST00000460408 PCGF3Q3KNV8 242 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 PPP6R3Q5H9R7 873 aaPredicted RBP3.44□□□□□ -1.86
RFC4-211ENST00000460408 FSCBQ5H9T9 825 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 RAB41Q5JT25 222 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 FAM69BQ5VUD6 431 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 METTL2BQ6P1Q9 378 aaKnown RBP3.44□□□□□ -1.86
RFC4-211ENST00000460408 C8orf82Q6P1X6 216 aaPredicted RBP3.44□□□□□ -1.86
RFC4-211ENST00000460408 B3GNT6Q6ZMB0 384 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 TICAM1Q8IUC6 712 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 RNF168Q8IYW5 571 aaPredicted RBP3.44□□□□□ -1.86
RFC4-211ENST00000460408 SPATA6LQ8N4H0 392 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 HJURPQ8NCD3 748 aaPredicted RBP3.44□□□□□ -1.86
RFC4-211ENST00000460408 ASB5Q8WWX0 329 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 ELMOD3Q96FG2 381 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 METTL2AQ96IZ6 378 aaKnown RBP3.44□□□□□ -1.86
RFC4-211ENST00000460408 LRFN5Q96NI6 719 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 ACOX2Q99424 681 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 DCLK3Q9C098 648 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 GPR108Q9NPR9 543 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 HINT3Q9NQE9 182 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms