RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	PGRMC1	O00264	195 aa	Known RBP	10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	CES2	O00748	559 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	BUD23	O43709	281 aa	Known RBP	10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	SDC3	O75056	442 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	ANXA9	O76027	345 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	STK10	O94804	968 aa	Known RBP	10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	IFNB1	P01574	187 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	FUCA1	P04066	466 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	GIMD1	P0DJR0	217 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	EPHA8	P29322	1005 aa	Predicted RBP	10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	STIP1	P31948	543 aa	Known RBP	10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	TRIM23	P36406	574 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	GRIA1	P42261	906 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	RABIF	P47224	123 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	RXRG	P48443	463 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	SPINT3	P49223	89 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	MTM1	Q13496	603 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	PDE1C	Q14123	709 aa	Predicted RBP	10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	ARHGEF7	Q14155	803 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	P3H1	Q32P28	736 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	PNCK	Q6P2M8	343 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	DBX2	Q6ZNG2	339 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	RBFA	Q8N0V3	343 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	PDCD7	Q8N8D1	485 aa	Known RBP	10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	GPR26	Q8NDV2	337 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	SAP25	Q8TEE9	199 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	NAPG	Q99747	312 aa	Predicted RBP	10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	APOO	Q9BUR5	198 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	ERVMER34-1	Q9H9K5	563 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	ETNK1	Q9HBU6	452 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	FGF22	Q9HCT0	170 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	GDF3	Q9NR23	364 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	TM7SF3	Q9NS93	570 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	PIH1D1	Q9NWS0	290 aa	Known RBP	10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	UCKL1	Q9NWZ5	548 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	TMPRSS11E	Q9UL52	423 aa		10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	CNOT6	Q9ULM6	557 aa	Known RBP	10.24	□□□□□ -0.77
MRPL55-223	ENST00000459783	DCDC2B	A2VCK2	349 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	GAPDHS	O14556	408 aa	Predicted RBP	10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	GIPC1	O14908	333 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	SCAMP1	O15126	338 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	GPR39	O43194	453 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	SH3BP5	O60239	455 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	PCDHGA12	O60330	932 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	CBFA2T3	O75081	653 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	AP2A1	O95782	977 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	CER1	O95813	267 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	SLC4A1	P02730	911 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	FGF1	P05230	155 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	CELA2B	P08218	269 aa	Predicted RBP	10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	ZNF883	P0CG24	379 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	BPI	P17213	487 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	TCP1	P17987	556 aa	Known RBP	10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	HLA-DPA1	P20036	260 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	COIL	P38432	576 aa	Predicted RBP	10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	CCT8	P50990	548 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	ATXN3	P54252	364 aa	Predicted RBP	10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	YPEL5	P62699	121 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	DPT	Q07507	201 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	SEMA5A	Q13591	1074 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	NFATC4	Q14934	902 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	ALG11	Q2TAA5	492 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	HENMT1	Q5T8I9	393 aa	Known RBP	10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	IL27RA	Q6UWB1	636 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	MACC1	Q6ZN28	852 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	ZNF765	Q7L2R6	523 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	TRIM74	Q86UV6	250 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	HEATR4	Q86WZ0	1026 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	SLC25A45	Q8N413	288 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	BAHD1	Q8TBE0	780 aa	Predicted RBP	10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	MAIP1	Q8WWC4	291 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	OR1E3	Q8WZA6	343 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	PDXP	Q96GD0	296 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	CAPZA3	Q96KX2	299 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	TBL1Y	Q9BQ87	522 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	C1QTNF7	Q9BXJ2	289 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	TEX101	Q9BY14	249 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	ZFYVE1	Q9HBF4	777 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	ARNT2	Q9HBZ2	717 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	BPIFA1	Q9NP55	256 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	IL17C	Q9P0M4	197 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	CDV3	Q9UKY7	258 aa	Known RBP	10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	ARL5A	Q9Y689	179 aa		10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	TP53BP1	Q12888	1972 aa	Predicted RBP	10.23	□□□□□ -0.77
MRPL55-223	ENST00000459783	ASCC3	Q8N3C0	2202 aa	Known RBP	10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	DMXL1	Q9Y485	3027 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	TCRBV7S3A2	A0A539	114 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	ZNF189	O75820	626 aa	Predicted RBP	10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	NME1	P15531	152 aa	Known RBP	10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	TPH1	P17752	444 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	KIAA1024L	P59773	190 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	ETF1	P62495	437 aa	Known RBP	10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	CDK3	Q00526	305 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	PRPSAP1	Q14558	356 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	TRIP13	Q15645	432 aa	Predicted RBP	10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	ALS2CL	Q60I27	953 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	ADAMTSL4	Q6UY14	1074 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	SYT10	Q6XYQ8	523 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	ZNF534	Q76KX8	674 aa		10.22	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms