RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 C8orf82Q6P1X6 216 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-202ENST00000459727 KLHDC10Q6PID8 442 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 ZNF783Q6ZMS7 281 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 GK5Q6ZS86 529 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 TFAP2DQ7Z6R9 452 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 CTU1Q7Z7A3 348 aaKnown RBP8.84□□□□□ -0.99
HDAC3-202ENST00000459727 RNF180Q86T96 592 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 ISCA2Q86U28 154 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 COLGALT2Q8IYK4 626 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 ABI1Q8IZP0 508 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 FBXO39Q8N4B4 442 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 AADATQ8N5Z0 425 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 OR2T34Q8NGX1 318 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 OR2T3Q8NH03 318 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 OR4L1Q8NH43 312 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 PSMG2Q969U7 264 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 PLD4Q96BZ4 506 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 SGF29Q96ES7 293 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 ZNF419Q96HQ0 510 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-202ENST00000459727 SLC45A3Q96JT2 553 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 PPP1R36Q96LQ0 422 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 TMEM209Q96SK2 561 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 NDNQ99608 321 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 NPAS2Q99743 824 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 SEMA3CQ99985 751 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 LBHD1Q9BQE6 289 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-202ENST00000459727 CINPQ9BW66 212 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-202ENST00000459727 ADGRE3Q9BY15 652 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 MRPL9Q9BYD2 267 aaKnown RBP8.84□□□□□ -0.99
HDAC3-202ENST00000459727 ALG9Q9H6U8 611 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 COPS7BQ9H9Q2 264 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-202ENST00000459727 CYP4F12Q9HCS2 524 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 SDR39U1Q9NRG7 319 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-202ENST00000459727 PNPLA3Q9NST1 481 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 NLE1Q9NVX2 485 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-202ENST00000459727 TMEM161AQ9NX61 479 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 TUBA8Q9NY65 449 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-202ENST00000459727 ABCD2Q9UBJ2 740 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 CD300AQ9UGN4 299 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 PTBP2Q9UKA9 531 aaKnown RBP8.84□□□□□ -0.99
HDAC3-202ENST00000459727 AP3M1Q9Y2T2 418 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 PTPRDP23468 1912 aa8.84□□□□□ -1
HDAC3-202ENST00000459727 SLC12A8A0AV02 714 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 EIF4E1BA6NMX2 242 aaKnown RBP8.83□□□□□ -1
HDAC3-202ENST00000459727 FAM155AB1AL88 458 aaPredicted RBP8.83□□□□□ -1
HDAC3-202ENST00000459727 NDUFS3O75489 264 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 CLDN11O75508 207 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 GOT2P00505 430 aaKnown RBP8.83□□□□□ -1
HDAC3-202ENST00000459727 SLC10A3P09131 477 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 TTKP33981 857 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 GMPRP36959 345 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 OR1G1P47890 313 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 CLCN4P51793 760 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 ADARP55265 1226 aaKnown RBP8.83□□□□□ -1
HDAC3-202ENST00000459727 PEX6Q13608 980 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 TLR1Q15399 786 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 TRIM71Q2Q1W2 868 aaKnown RBP8.83□□□□□ -1
HDAC3-202ENST00000459727 C11orf91Q3C1V1 193 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 UNC50Q53HI1 259 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 GPR158Q5T848 1215 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 LCN8Q6JVE9 175 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 KRT80Q6KB66 452 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 RGMBQ6NW40 437 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 METTL2BQ6P1Q9 378 aaKnown RBP8.83□□□□□ -1
HDAC3-202ENST00000459727 B3GNT6Q6ZMB0 384 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 ANKS3Q6ZW76 656 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 CHST9Q7L1S5 443 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 CAMK1DQ8IU85 385 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 RNF135Q8IUD6 432 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.83□□□□□ -1
HDAC3-202ENST00000459727 PTGR2Q8N8N7 351 aaPredicted RBP8.83□□□□□ -1
HDAC3-202ENST00000459727 TMEM102Q8N9M5 508 aaPredicted RBP8.83□□□□□ -1
HDAC3-202ENST00000459727 TERB1Q8NA31 727 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 LEMD2Q8NC56 503 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 TRPV1Q8NER1 839 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 HASPINQ8TF76 798 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 PPP1R13LQ8WUF5 828 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 TWIST2Q8WVJ9 160 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 PHF21BQ96EK2 531 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 PRICKLE1Q96MT3 831 aaPredicted RBP8.83□□□□□ -1
HDAC3-202ENST00000459727 PGLYRP2Q96PD5 576 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 PSKH2Q96QS6 385 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 PKP2Q99959 881 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 TMEM175Q9BSA9 504 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 C9orf16Q9BUW7 83 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 PDFQ9HBH1 243 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 TIMMDC1Q9NPL8 285 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 NDFIP2Q9NV92 336 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 CCDC167Q9P0B6 97 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 ACTR3BQ9P1U1 418 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 HSFX1Q9UBD0 423 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 UBA2Q9UBT2 640 aaPredicted RBP8.83□□□□□ -1
HDAC3-202ENST00000459727 SUN2Q9UH99 717 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 DNMT3LQ9UJW3 386 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 G3BP2Q9UN86 482 aaKnown RBP8.83□□□□□ -1
HDAC3-202ENST00000459727 TNPO3Q9Y5L0 923 aaKnown RBP8.83□□□□□ -1
HDAC3-202ENST00000459727 NLRC5Q86WI3 1866 aa8.83□□□□□ -1
HDAC3-202ENST00000459727 A0A0J9YYE9 177 aa8.82□□□□□ -1
HDAC3-202ENST00000459727 ILVBLA1L0T0 632 aa8.82□□□□□ -1
HDAC3-202ENST00000459727 CCDC162PA2VCL2 907 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms