RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 RAET1GQ6H3X3 334 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 ZNF662Q6ZS27 426 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 PID1Q7Z2X4 250 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 HID1Q8IV36 788 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 CDKL3Q8IVW4 592 aaPredicted RBP20.72■□□□□ 0.91
VARS-218ENST00000459667 TSACCQ96A04 125 aaPredicted RBP20.72■□□□□ 0.91
VARS-218ENST00000459667 TBATAQ96M53 351 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 ALS2CR12Q96Q35 445 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 FAM118BQ9BPY3 351 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 FERMT1Q9BQL6 677 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 LRRC61Q9BV99 259 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 C10orf88Q9H8K7 445 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 GOLGA6AQ9NYA3 693 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 UBP1Q9NZI7 540 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 CD84Q9UIB8 345 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 CSNK1G3Q9Y6M4 447 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 C1orf232A0A0U1RR37 186 aa20.71■□□□□ 0.91
VARS-218ENST00000459667 GOLGA6L9A6NEM1 432 aa20.71■□□□□ 0.91
VARS-218ENST00000459667 PMPCBO75439 489 aa20.71■□□□□ 0.91
VARS-218ENST00000459667 RASGRP1O95267 797 aa20.71■□□□□ 0.91
VARS-218ENST00000459667 HOXC4P09017 264 aaPredicted RBP20.71■□□□□ 0.91
VARS-218ENST00000459667 RBP3P10745 1247 aa20.71■□□□□ 0.91
VARS-218ENST00000459667 CKMT2P17540 419 aa20.71■□□□□ 0.91
VARS-218ENST00000459667 ACADVLP49748 655 aa20.71■□□□□ 0.91
VARS-218ENST00000459667 HK3P52790 923 aa20.71■□□□□ 0.91
VARS-218ENST00000459667 EIF3EP60228 445 aaKnown RBP20.71■□□□□ 0.91
VARS-218ENST00000459667 SRP54P61011 504 aaKnown RBP20.71■□□□□ 0.91
VARS-218ENST00000459667 RFLNAQ6ZTI6 216 aa20.71■□□□□ 0.91
VARS-218ENST00000459667 NYAP1Q6ZVC0 841 aa20.71■□□□□ 0.91
VARS-218ENST00000459667 RD3Q7Z3Z2 195 aa20.71■□□□□ 0.91
VARS-218ENST00000459667 OR56A4Q8NGH8 313 aa20.71■□□□□ 0.91
VARS-218ENST00000459667 PDXPQ96GD0 296 aa20.71■□□□□ 0.91
VARS-218ENST00000459667 DUSP23Q9BVJ7 150 aa20.71■□□□□ 0.91
VARS-218ENST00000459667 LGR4Q9BXB1 951 aa20.71■□□□□ 0.91
VARS-218ENST00000459667 LZTFL1Q9NQ48 299 aa20.71■□□□□ 0.91
VARS-218ENST00000459667 FAM153AQ9UHL3 310 aa20.71■□□□□ 0.91
VARS-218ENST00000459667 TRHDEQ9UKU6 1024 aa20.71■□□□□ 0.91
VARS-218ENST00000459667 TMEM202A6NGA9 273 aa20.7■□□□□ 0.9
VARS-218ENST00000459667 F5H423 210 aaPredicted RBP20.7■□□□□ 0.9
VARS-218ENST00000459667 RFPL3O75679 317 aa20.7■□□□□ 0.9
VARS-218ENST00000459667 MYCLP1P12525 358 aaPredicted RBP20.7■□□□□ 0.9
VARS-218ENST00000459667 TEAD1P28347 426 aa20.7■□□□□ 0.9
VARS-218ENST00000459667 DAB2P98082 770 aa20.7■□□□□ 0.9
VARS-218ENST00000459667 DPTQ07507 201 aa20.7■□□□□ 0.9
VARS-218ENST00000459667 C1orf61Q13536 156 aa20.7■□□□□ 0.9
VARS-218ENST00000459667 ZNF765Q7L2R6 523 aa20.7■□□□□ 0.9
VARS-218ENST00000459667 HEATR4Q86WZ0 1026 aa20.7■□□□□ 0.9
VARS-218ENST00000459667 AP2M1Q96CW1 435 aa20.7■□□□□ 0.9
VARS-218ENST00000459667 FCRL5Q96RD9 977 aa20.7■□□□□ 0.9
VARS-218ENST00000459667 ABCG8Q9H221 673 aa20.7■□□□□ 0.9
VARS-218ENST00000459667 FGF22Q9HCT0 170 aa20.7■□□□□ 0.9
VARS-218ENST00000459667 PHPT1Q9NRX4 125 aaPredicted RBP20.7■□□□□ 0.9
VARS-218ENST00000459667 RSPH14Q9UHP6 348 aa20.7■□□□□ 0.9
VARS-218ENST00000459667 KLK13Q9UKR3 277 aa20.7■□□□□ 0.9
VARS-218ENST00000459667 PCDHGA1Q9Y5H4 931 aa20.7■□□□□ 0.9
VARS-218ENST00000459667 PDE2AO00408 941 aaPredicted RBP20.69■□□□□ 0.9
VARS-218ENST00000459667 GCATO75600 419 aa20.69■□□□□ 0.9
VARS-218ENST00000459667 NDST3O95803 873 aa20.69■□□□□ 0.9
VARS-218ENST00000459667 GPR1P46091 355 aa20.69■□□□□ 0.9
VARS-218ENST00000459667 GSE1Q14687 1217 aa20.69■□□□□ 0.9
VARS-218ENST00000459667 CDKN3Q16667 212 aa20.69■□□□□ 0.9
VARS-218ENST00000459667 DEFB133Q30KQ1 61 aa20.69■□□□□ 0.9
VARS-218ENST00000459667 KCTD16Q68DU8 428 aa20.69■□□□□ 0.9
VARS-218ENST00000459667 CCDC70Q6NSX1 233 aa20.69■□□□□ 0.9
VARS-218ENST00000459667 DARS2Q6PI48 645 aaKnown RBP20.69■□□□□ 0.9
VARS-218ENST00000459667 LYSMD3Q7Z3D4 306 aa20.69■□□□□ 0.9
VARS-218ENST00000459667 RAVER1Q8IY67 606 aaKnown RBP20.69■□□□□ 0.9
VARS-218ENST00000459667 NRSN1Q8IZ57 195 aa20.69■□□□□ 0.9
VARS-218ENST00000459667 FSTL5Q8N475 847 aaPredicted RBP20.69■□□□□ 0.9
VARS-218ENST00000459667 TTC13Q8NBP0 860 aa20.69■□□□□ 0.9
VARS-218ENST00000459667 CCHCR1Q8TD31 782 aa20.69■□□□□ 0.9
VARS-218ENST00000459667 SCAMP4Q969E2 229 aa20.69■□□□□ 0.9
VARS-218ENST00000459667 APOLD1Q96LR9 279 aa20.69■□□□□ 0.9
VARS-218ENST00000459667 TEX101Q9BY14 249 aa20.69■□□□□ 0.9
VARS-218ENST00000459667 CLPBQ9H078 707 aa20.69■□□□□ 0.9
VARS-218ENST00000459667 PPP2R2CQ9Y2T4 447 aa20.69■□□□□ 0.9
VARS-218ENST00000459667 NEUROG3Q9Y4Z2 214 aa20.69■□□□□ 0.9
VARS-218ENST00000459667 TNFRSF10CO14798 259 aa20.68■□□□□ 0.9
VARS-218ENST00000459667 KCNN4O15554 427 aa20.68■□□□□ 0.9
VARS-218ENST00000459667 STK10O94804 968 aaKnown RBP20.68■□□□□ 0.9
VARS-218ENST00000459667 TNFP01375 233 aa20.68■□□□□ 0.9
VARS-218ENST00000459667 ANXA6P08133 673 aa20.68■□□□□ 0.9
VARS-218ENST00000459667 PIRTP0C851 137 aa20.68■□□□□ 0.9
VARS-218ENST00000459667 CTSEP14091 401 aa20.68■□□□□ 0.9
VARS-218ENST00000459667 WNT3AP56704 352 aa20.68■□□□□ 0.9
VARS-218ENST00000459667 CDK3Q00526 305 aa20.68■□□□□ 0.9
VARS-218ENST00000459667 KLF1Q13351 362 aaPredicted RBP20.68■□□□□ 0.9
VARS-218ENST00000459667 ELOCQ15369 112 aa20.68■□□□□ 0.9
VARS-218ENST00000459667 SEL1L2Q5TEA6 688 aa20.68■□□□□ 0.9
VARS-218ENST00000459667 ITPRIPL1Q6GPH6 555 aa20.68■□□□□ 0.9
VARS-218ENST00000459667 ZCCHC8Q6NZY4 707 aaKnown RBP20.68■□□□□ 0.9
VARS-218ENST00000459667 KDELC1Q6UW63 502 aa20.68■□□□□ 0.9
VARS-218ENST00000459667 DHRS13Q6UX07 377 aa20.68■□□□□ 0.9
VARS-218ENST00000459667 OR1E3Q8WZA6 343 aa20.68■□□□□ 0.9
VARS-218ENST00000459667 OXNAD1Q96HP4 312 aaPredicted RBP20.68■□□□□ 0.9
VARS-218ENST00000459667 GBA3Q9H227 469 aa20.68■□□□□ 0.9
VARS-218ENST00000459667 MRPL40Q9NQ50 206 aaKnown RBP20.68■□□□□ 0.9
VARS-218ENST00000459667 PKD2L2Q9NZM6 624 aa20.68■□□□□ 0.9
VARS-218ENST00000459667 MOSPD1Q9UJG1 213 aa20.68■□□□□ 0.9
VARS-218ENST00000459667 DGKBQ9Y6T7 804 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms