RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 ARHGEF18Q6ZSZ5 1173 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 RFLNAQ6ZTI6 216 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 Q6ZVL8 140 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 HSD11B1LQ7Z5J1 315 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 ABI3BPQ7Z7G0 1075 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 DENND6BQ8NEG7 585 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 IPMKQ8NFU5 416 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 MAGOHBQ96A72 148 aaKnown RBP10.06□□□□□ -0.8
ATG4A-206ENST00000457035 IFT43Q96FT9 208 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 MYOCQ99972 504 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 ETNK1Q9HBU6 452 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 ARNT2Q9HBZ2 717 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 AASDHPPTQ9NRN7 309 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 ANKRD6Q9Y2G4 727 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 MYLKQ15746 1914 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 PIKFYVEQ9Y2I7 2098 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 ZFC3H1O60293 1989 aaKnown RBP10.05□□□□□ -0.8
ATG4A-206ENST00000457035 PDE2AO00408 941 aaPredicted RBP10.05□□□□□ -0.8
ATG4A-206ENST00000457035 FOXD2O60548 495 aaPredicted RBP10.05□□□□□ -0.8
ATG4A-206ENST00000457035 SYPP08247 313 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 C1SP09871 688 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 PIRTP0C851 137 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 ENGP17813 658 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 HLA-DPA1P20036 260 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 CASQ1P31415 396 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 IGFALSP35858 605 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 ETV3P41162 512 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 CTSKP43235 329 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 STC1P52823 247 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 PFN3P60673 137 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 GRIK2Q13002 908 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 SPARCL1Q14515 664 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 LRRC14Q15048 493 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 ACOX1Q15067 660 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 IRF4Q15306 451 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 TEAD4Q15561 434 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 KCTD19Q17RG1 926 aaPredicted RBP10.05□□□□□ -0.8
ATG4A-206ENST00000457035 FAXCQ5TGI0 409 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 CCDC70Q6NSX1 233 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 KDM7AQ6ZMT4 941 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 Q6ZSR6 202 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 TMC3Q7Z5M5 1100 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 NLRP8Q86W28 1048 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 SPATS2Q86XZ4 545 aaKnown RBP10.05□□□□□ -0.8
ATG4A-206ENST00000457035 RAVER1Q8IY67 606 aaKnown RBP10.05□□□□□ -0.8
ATG4A-206ENST00000457035 PELI3Q8N2H9 469 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 SLC25A41Q8N5S1 370 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 FAM174AQ8TBP5 190 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 NETO1Q8TDF5 533 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 TRIM44Q96DX7 344 aaPredicted RBP10.05□□□□□ -0.8
ATG4A-206ENST00000457035 KLHDC7BQ96G42 594 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 PPP1R2P1Q96PQ5 205 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 FICDQ9BVA6 458 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 C1QTNF7Q9BXJ2 289 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 ZDHHC5Q9C0B5 715 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 GPR27Q9NS67 375 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 KCTD5Q9NXV2 234 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 RNF14Q9UBS8 474 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 NEU2Q9Y3R4 380 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 SPO11Q9Y5K1 396 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 SNX11Q9Y5W9 270 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 ASXL3Q9C0F0 2248 aa10.05□□□□□ -0.8
ATG4A-206ENST00000457035 C1orf232A0A0U1RR37 186 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 FPGTO14772 594 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 AURKAO14965 403 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 PSMD3O43242 534 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 PHF2O75151 1096 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 AP2A1O95782 977 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 FGF1P05230 155 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 THEGLP0DJG4 465 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 ACTN2P35609 894 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 TRIM23P36406 574 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 FDFT1P37268 417 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 SPINT3P49223 89 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 NXPH1P58417 271 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 DPTQ07507 201 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 INPP5AQ14642 412 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 HLA-BQ31612 363 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 AASDHQ4L235 1098 aaPredicted RBP10.04□□□□□ -0.8
ATG4A-206ENST00000457035 PPM1JQ5JR12 505 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 TPRG1LQ5T0D9 272 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 DENND2CQ68D51 928 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 PNCKQ6P2M8 343 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 CCDC137Q6PK04 289 aaKnown RBP10.04□□□□□ -0.8
ATG4A-206ENST00000457035 KYAT3Q6YP21 454 aaKnown RBP10.04□□□□□ -0.8
ATG4A-206ENST00000457035 GSTA5Q7RTV2 222 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 LYSMD3Q7Z3D4 306 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 DCP2Q8IU60 420 aaKnown RBP10.04□□□□□ -0.8
ATG4A-206ENST00000457035 TAB3Q8N5C8 712 aaPredicted RBP10.04□□□□□ -0.8
ATG4A-206ENST00000457035 CCDC89Q8N998 374 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 PLA2G15Q8NCC3 412 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 OR13H1Q8NG92 308 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 SKA1Q96BD8 255 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 DTD2Q96FN9 168 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 CAPZA3Q96KX2 299 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 SRPK1Q96SB4 655 aaKnown RBP10.04□□□□□ -0.8
ATG4A-206ENST00000457035 TBL1YQ9BQ87 522 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 APOL2Q9BQE5 337 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 FSD1LQ9BXM9 530 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 ABCG8Q9H221 673 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms