RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 CLCNKAP51800 687 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 WNT3AP56704 352 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 PFN3P60673 137 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 NCALDP61601 193 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 MRPS21P82921 87 aaKnown RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 NR1H3Q13133 447 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 NAB1Q13506 487 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 RIPK1Q13546 671 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 ANKRD20A4Q4UJ75 823 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 WLSQ5T9L3 541 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 DENND2CQ68D51 928 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 LINGO4Q6UY18 593 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 USP30Q70CQ3 517 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 BZW1Q7L1Q6 419 aaKnown RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 ZNF557Q8N988 423 aaPredicted RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 ZNF454Q8N9F8 522 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 FBXO36Q8NEA4 188 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 LKAAEAR1Q8TD35 194 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 BRSK1Q8TDC3 778 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 PDLIM5Q96HC4 596 aaKnown RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 CALN1Q9BXU9 219 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 MTG2Q9H4K7 406 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 EPHX3Q9H6B9 360 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 C8orf33Q9H7E9 229 aaPredicted RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 ZFP14Q9HCL3 533 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 SMPD4Q9NXE4 827 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 CLDND1Q9NY35 253 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 MMP17Q9ULZ9 603 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 CHKBQ9Y259 395 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 MYO7AQ13402 2215 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 NEDD8-MDP1E9PL57 170 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 G3V2L1 256 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 HRO43593 1189 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 SPAG6O75602 509 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 NFATC1O95644 943 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 TBX6O95947 436 aaPredicted RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 MTHFD2P13995 350 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 SSTR1P30872 391 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 CRHR1P34998 444 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 ARL4AP40617 200 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 MAGEA9P43362 315 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 ZFP36L2P47974 494 aaKnown RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 CCT5P48643 541 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 DNA2P51530 1060 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 DYNLT1P63172 113 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 SULT2A1Q06520 285 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 GPS1Q13098 491 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 ITPRIPL2Q3MIP1 535 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 ZNF528Q3MIS6 628 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 BCL7AQ4VC05 210 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 ARHGAP15Q53QZ3 475 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 ATXN7L2Q5T6C5 722 aaPredicted RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 KAZNQ674X7 775 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 CCDC70Q6NSX1 233 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 HSD11B1LQ7Z5J1 315 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 TSPAN33Q86UF1 283 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 ZC3HC1Q86WB0 502 aaKnown RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 RNF135Q8IUD6 432 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 CEP97Q8IW35 865 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 DDHD1Q8NEL9 900 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 TMA16Q96EY4 203 aaKnown RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 ZC3H10Q96K80 434 aaKnown RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 RPRD1AQ96P16 312 aaPredicted RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 TMEM237Q96Q45 408 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 OLFM1Q99784 485 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 VPS11Q9H270 941 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 POPDC3Q9HBV1 291 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 LTB4R2Q9NPC1 389 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 IL26Q9NPH9 171 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 CHRAC1Q9NRG0 131 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 DNAJC17Q9NVM6 304 aaKnown RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 FNDC3AQ9Y2H6 1198 aaKnown RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 PRSS21Q9Y6M0 314 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 NPIPB8E9PQR5 432 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 H3BQ06 376 aaPredicted RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 SLC9A3R1O14745 358 aaPredicted RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 KAT7O95251 611 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 NDST3O95803 873 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 HMBSP08397 361 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 SLC35E2BP0CK96 405 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 FGF3P11487 239 aaPredicted RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 HLA-DPA1P20036 260 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 CD86P42081 329 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 TNNT3P45378 269 aaPredicted RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 LMAN1P49257 510 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 DGKGP49619 791 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 MAXP61244 160 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 NFKB2Q00653 900 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 DMWDQ09019 674 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 TDGQ13569 410 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 KRT81Q14533 505 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 SKIV2LQ15477 1246 aaKnown RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 SPOUT1Q5T280 376 aaKnown RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 TLDC1Q6P9B6 456 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 ADAMTSL4Q6UY14 1074 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 GCNT7Q6ZNI0 430 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 EDAQ92838 391 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 MRGPRX1Q96LB2 322 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 PAFAH2Q99487 392 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 AGAP2Q99490 1192 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms