RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 NFKB1P19838 968 aa13.31□□□□□ -0.28
LINC00343-203ENST00000454555 PLXNA3P51805 1871 aa13.31□□□□□ -0.28
LINC00343-203ENST00000454555 POU4F1Q01851 419 aa13.31□□□□□ -0.28
LINC00343-203ENST00000454555 NME3Q13232 169 aa13.31□□□□□ -0.28
LINC00343-203ENST00000454555 VEPH1Q14D04 833 aa13.31□□□□□ -0.28
LINC00343-203ENST00000454555 DLG2Q15700 870 aa13.31□□□□□ -0.28
LINC00343-203ENST00000454555 SPATS1Q496A3 300 aa13.31□□□□□ -0.28
LINC00343-203ENST00000454555 CERCAMQ5T4B2 595 aa13.31□□□□□ -0.28
LINC00343-203ENST00000454555 SDHAF4Q5VUM1 108 aa13.31□□□□□ -0.28
LINC00343-203ENST00000454555 NXNQ6DKJ4 435 aa13.31□□□□□ -0.28
LINC00343-203ENST00000454555 LSMEM2Q8N112 164 aa13.31□□□□□ -0.28
LINC00343-203ENST00000454555 DEFB123Q8N688 67 aa13.31□□□□□ -0.28
LINC00343-203ENST00000454555 PPHLN1Q8NEY8 458 aaKnown RBP13.31□□□□□ -0.28
LINC00343-203ENST00000454555 HM13Q8TCT9 377 aa13.31□□□□□ -0.28
LINC00343-203ENST00000454555 PBXIP1Q96AQ6 731 aa13.31□□□□□ -0.28
LINC00343-203ENST00000454555 EME1Q96AY2 570 aa13.31□□□□□ -0.28
LINC00343-203ENST00000454555 NMD3Q96D46 503 aaKnown RBP13.31□□□□□ -0.28
LINC00343-203ENST00000454555 CNBD2Q96M20 576 aa13.31□□□□□ -0.28
LINC00343-203ENST00000454555 FAM210AQ96ND0 272 aa13.31□□□□□ -0.28
LINC00343-203ENST00000454555 GUCD1Q96NT3 240 aa13.31□□□□□ -0.28
LINC00343-203ENST00000454555 PKP2Q99959 881 aa13.31□□□□□ -0.28
LINC00343-203ENST00000454555 TRMOQ9BU70 441 aa13.31□□□□□ -0.28
LINC00343-203ENST00000454555 PRKD2Q9BZL6 878 aa13.31□□□□□ -0.28
LINC00343-203ENST00000454555 WDR6Q9NNW5 1121 aaKnown RBP13.31□□□□□ -0.28
LINC00343-203ENST00000454555 IPO11Q9UI26 975 aaKnown RBP13.31□□□□□ -0.28
LINC00343-203ENST00000454555 AP4S1Q9Y587 144 aa13.31□□□□□ -0.28
LINC00343-203ENST00000454555 FAM92AA1XBS5 289 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 DLX3O60479 287 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 GLP2RO95838 553 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 CCDC166P0CW27 439 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 CCNCP24863 283 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 SLC7A1P30825 629 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 SLC5A3P53794 718 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 INHBCP55103 352 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 MS4A2Q01362 244 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 FAM45BPQ6NSW5 357 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 GPRIN1Q7Z2K8 1008 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 GALNT7Q86SF2 657 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 ITIH5Q86UX2 942 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 CHERPQ8IWX8 916 aaKnown RBP13.3□□□□□ -0.28
LINC00343-203ENST00000454555 CENPLQ8N0S6 344 aaPredicted RBP13.3□□□□□ -0.28
LINC00343-203ENST00000454555 LILRA2Q8N149 483 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 PACRGLQ8N7B6 248 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 FAM45AQ8TCE6 357 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 GIPC2Q8TF65 315 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 MYLIPQ8WY64 445 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 PSMG2Q969U7 264 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 MYRFLQ96LU7 910 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 FCRL5Q96RD9 977 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 SLC25A23Q9BV35 468 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 TTLL2Q9BWV7 592 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 FBXO44Q9H4M3 255 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 SFXN1Q9H9B4 322 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 MEAF6Q9HAF1 191 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 CHRAC1Q9NRG0 131 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 PNPLA3Q9NST1 481 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 TUBA8Q9NY65 449 aaPredicted RBP13.3□□□□□ -0.28
LINC00343-203ENST00000454555 XPR1Q9UBH6 696 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 AK5Q9Y6K8 562 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 HEATR9A2RTY3 570 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 BBIP1A8MTZ0 92 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 SDHDO14521 159 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 CFLARO15519 480 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 USP12O75317 370 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 ZNF26P17031 533 aaPredicted RBP13.3□□□□□ -0.28
LINC00343-203ENST00000454555 HMGA1P17096 107 aaKnown RBP13.3□□□□□ -0.28
LINC00343-203ENST00000454555 NMBRP28336 390 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 ACADVLP49748 655 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 GEMP55040 296 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 DAOAP59103 153 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 PSME3P61289 254 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 PPP2R5DQ14738 602 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 SAMD4BQ5PRF9 694 aaKnown RBP13.3□□□□□ -0.28
LINC00343-203ENST00000454555 PM20D1Q6GTS8 502 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 ANKRD54Q6NXT1 300 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 DNAJB7Q7Z6W7 309 aaPredicted RBP13.3□□□□□ -0.28
LINC00343-203ENST00000454555 SLC22A9Q8IVM8 553 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 ELMOD1Q8N336 334 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 LZTR1Q8N653 840 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 EFCAB3Q8N7B9 438 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 ZFP28Q8NHY6 868 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 CALML6Q8TD86 181 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 GPR152Q8TDT2 470 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 KCTD4Q8WVF5 259 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 TRMT2BQ96GJ1 504 aaKnown RBP13.3□□□□□ -0.28
LINC00343-203ENST00000454555 ZNF512Q96ME7 567 aaPredicted RBP13.3□□□□□ -0.28
LINC00343-203ENST00000454555 GPR78Q96P69 363 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 PRPF18Q99633 342 aaKnown RBP13.3□□□□□ -0.28
LINC00343-203ENST00000454555 TRPC7Q9HCX4 862 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 SPAG4Q9NPE6 437 aa13.3□□□□□ -0.28
LINC00343-203ENST00000454555 PTBP2Q9UKA9 531 aaKnown RBP13.3□□□□□ -0.28
LINC00343-203ENST00000454555 FAM95CA0A1B0GW59 222 aa13.29□□□□□ -0.28
LINC00343-203ENST00000454555 TCRBV3S1A0A5B6 114 aa13.29□□□□□ -0.28
LINC00343-203ENST00000454555 CCDC160A6NGH7 325 aa13.29□□□□□ -0.28
LINC00343-203ENST00000454555 ZNF701M0R085 212 aaPredicted RBP13.29□□□□□ -0.28
LINC00343-203ENST00000454555 TRIM24O15164 1050 aa13.29□□□□□ -0.28
LINC00343-203ENST00000454555 LINC01565O15544 149 aa13.29□□□□□ -0.28
LINC00343-203ENST00000454555 XYLBO75191 536 aa13.29□□□□□ -0.28
LINC00343-203ENST00000454555 RFPL2O75678 378 aa13.29□□□□□ -0.28
LINC00343-203ENST00000454555 OR6B1O95007 311 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms