RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 CLCNKBP51801 687 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 MAP2K6P52564 334 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 HTRA4P83105 476 aaPredicted RBP7.83□□□□□ -1.16
BRCC3-208ENST00000453705 LMAN2Q12907 356 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 THOC5Q13769 683 aaKnown RBP7.83□□□□□ -1.16
BRCC3-208ENST00000453705 NOMO1Q15155 1222 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 RNASEH2BQ5TBB1 312 aaKnown RBP7.83□□□□□ -1.16
BRCC3-208ENST00000453705 CNKSR3Q6P9H4 555 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 ADCK1Q86TW2 530 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 KBTBD6Q86V97 674 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 CCDC25Q86WR0 208 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 CBWD2Q8IUF1 395 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 KSR1Q8IVT5 923 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 ARHGEF19Q8IW93 802 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 MCEMP1Q8IX19 187 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 SPATA4Q8NEY3 305 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 FAM81AQ8TBF8 368 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 METTL6Q8TCB7 284 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 C19orf60Q96EN9 201 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 MAML3Q96JK9 1138 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 KREMEN1Q96MU8 473 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 SEPSECSQ9HD40 501 aaKnown RBP7.83□□□□□ -1.16
BRCC3-208ENST00000453705 GAB2Q9UQC2 676 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 RUVBL1Q9Y265 456 aaKnown RBP7.83□□□□□ -1.16
BRCC3-208ENST00000453705 TMEM150BA6NC51 233 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 OR6C76A6NM76 312 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 MIF4GDA9UHW6 222 aaKnown RBP7.83□□□□□ -1.16
BRCC3-208ENST00000453705 TARM1B6A8C7 271 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 KCNK3O14649 394 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 MOCS3O95396 460 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 AK1P00568 194 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 TGFAP01135 160 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 CLEC3BP05452 202 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 CYP2C8P10632 490 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 HOXC8P31273 242 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 SLC5A2P31639 672 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 STARP49675 285 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 LIG4P49917 911 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 WNT7BP56706 349 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 PTENP60484 403 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 CDR2Q01850 454 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 RAB30Q15771 203 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 CCDC142Q17RM4 750 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 CCDC14Q49A88 953 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 COL13A1Q5TAT6 717 aaPredicted RBP7.83□□□□□ -1.16
BRCC3-208ENST00000453705 MFSD5Q6N075 450 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 GPR153Q6NV75 609 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 TTC23LQ6PF05 361 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 MFSD7Q6UXD7 560 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 USP53Q70EK8 1073 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 TAF8Q7Z7C8 310 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 ZBTB8OSQ8IWT0 167 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 ZCCHC7Q8N3Z6 543 aaKnown RBP7.83□□□□□ -1.16
BRCC3-208ENST00000453705 POMGNT1Q8WZA1 660 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 CNTNAP3BQ96NU0 1288 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 CNTNAP3Q9BZ76 1288 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 WNT8AQ9H1J5 351 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 IKZF4Q9H2S9 585 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 RIBC2Q9H4K1 309 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 ZNF395Q9H8N7 513 aaPredicted RBP7.83□□□□□ -1.16
BRCC3-208ENST00000453705 TREM1Q9NP99 234 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 BATF3Q9NR55 127 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 ERAP1Q9NZ08 941 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 UVRAGQ9P2Y5 699 aa7.83□□□□□ -1.16
BRCC3-208ENST00000453705 SCN10AQ9Y5Y9 1956 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 COL4A4P53420 1690 aaPredicted RBP7.82□□□□□ -1.16
BRCC3-208ENST00000453705 FRMPD3Q5JV73 1810 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 CCDC188H7C350 402 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 HNRNPDLO14979 420 aaKnown RBP7.82□□□□□ -1.16
BRCC3-208ENST00000453705 OGTO15294 1046 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 TADA2AO75478 443 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 SPAG6O75602 509 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 TMEM63AO94886 807 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 ATE1O95260 518 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 FHP07954 510 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 ACO1P21399 889 aaKnown RBP7.82□□□□□ -1.16
BRCC3-208ENST00000453705 ITGB8P26012 769 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 SLC11A1P49279 550 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 AARSP49588 968 aaKnown RBP eCLIP7.82□□□□□ -1.16
BRCC3-208ENST00000453705 VBP1P61758 197 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 NOMO3P69849 1222 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 PTP4A2Q12974 167 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 DNAJC3Q13217 504 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 CYLC2Q14093 348 aaPredicted RBP7.82□□□□□ -1.16
BRCC3-208ENST00000453705 ZMYND11Q15326 602 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 TYSND1Q2T9J0 566 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 NOMO2Q5JPE7 1267 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 TANGO2Q6ICL3 276 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 SV2AQ7L0J3 742 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 ZNF410Q86VK4 478 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 OR6S1Q8NH40 331 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 LIPHQ8WWY8 451 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 SEC14L1Q92503 715 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 SEMA4DQ92854 862 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 LRRC39Q96DD0 335 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 CCT7Q99832 543 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 ORAI3Q9BRQ5 295 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 HAPLN2Q9GZV7 340 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 LIN7BQ9HAP6 207 aa7.82□□□□□ -1.16
BRCC3-208ENST00000453705 CYP3A43Q9HB55 503 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms