RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 CCDC74AQ96AQ1 378 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 TDRD1Q9BXT4 1180 aaKnown RBP17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 PACSIN1Q9BY11 444 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 DPH1Q9BZG8 443 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 DPEP2Q9H4A9 486 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 SYNDIG1Q9H7V2 258 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 CARS2Q9HA77 564 aaKnown RBP17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 GOLGA6AQ9NYA3 693 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 APPL1Q9UKG1 709 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 ENTPD2Q9Y5L3 495 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 ASPMQ8IZT6 3477 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 EIF4E1BA6NMX2 242 aaKnown RBP17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 NTN3O00634 580 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 APOL1O14791 398 aa17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 PPP1R12AO14974 1030 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 NUDT21O43809 227 aaKnown RBP17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 PPIDQ08752 370 aaKnown RBP17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 BIRC2Q13490 618 aa17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 TCEAL1Q15170 157 aa17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 CLPPQ16740 277 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 C14orf28Q4W4Y0 310 aa17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 C3orf38Q5JPI3 329 aa17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 Q6ZVL8 140 aa17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 HSD11B1LQ7Z5J1 315 aa17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 TMEM159Q96B96 161 aa17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 AP2M1Q96CW1 435 aa17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 LIN37Q96GY3 246 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 NSMCE3Q96MG7 304 aa17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 SRPK1Q96SB4 655 aaKnown RBP17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 TMEM168Q9H0V1 697 aa17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 CDH19Q9H159 772 aa17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 CAAP1Q9H8G2 361 aa17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 PCDH9Q9HC56 1237 aa17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 DTLQ9NZJ0 730 aa17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 SATB2Q9UPW6 733 aa17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 DMXL2Q8TDJ6 3036 aa17.05■□□□□ 0.32
TNFRSF4-202ENST00000453580 SPEGQ15772 3267 aa17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 RGSL1A5PLK6 1076 aa17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 CAPN8A6NHC0 703 aa17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 IVLP07476 585 aa17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 CELA2BP08218 269 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 LHCGRP22888 699 aa17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 IFI35P80217 286 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 CERCAMQ5T4B2 595 aa17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 LRRC66Q68CR7 880 aa17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 ADAMTSL4Q6UY14 1074 aa17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 TECPR1Q7Z6L1 1165 aa17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 PQLC3Q8N755 202 aa17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 EXD1Q8NHP7 514 aa17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 GPBAR1Q8TDU6 330 aa17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 ATXN7L3BQ96GX2 97 aa17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 SLC46A1Q96NT5 459 aa17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 LYSMD1Q96S90 227 aa17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 LGR4Q9BXB1 951 aa17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 FRMD8Q9BZ67 464 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 LRRN3Q9H3W5 708 aa17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 MRPL40Q9NQ50 206 aaKnown RBP17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 RAD18Q9NS91 495 aa17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 PKD2L2Q9NZM6 624 aa17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 SLC17A4Q9Y2C5 497 aa17.04■□□□□ 0.32
TNFRSF4-202ENST00000453580 B4DGG1 531 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 D6RAR5 112 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 SPOPO43791 374 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 RPLP0P05388 317 aaKnown RBP17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 CEACAM5P06731 702 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 PDHA1P08559 390 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 CTPS1P17812 591 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 NR2C2P49116 596 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 DSC2Q02487 901 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 GBE1Q04446 702 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 LRP8Q14114 963 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 TFDP2Q14188 446 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 SLC9A4Q6AI14 798 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 CCDC70Q6NSX1 233 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 SARM1Q6SZW1 724 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 CRTC1Q6UUV9 634 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 CCNJLQ8IV13 435 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 RNF214Q8ND24 703 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 KCNE4Q8WWG9 221 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 RAPGEF5Q92565 580 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 HIC2Q96JB3 615 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 CALR3Q96L12 384 aaKnown RBP17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 UBL7Q96S82 380 aaPredicted RBP17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 CHP1Q99653 195 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 MLPHQ9BV36 600 aaPredicted RBP17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 TRIM5Q9C035 493 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 SPTLC3Q9NUV7 552 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 AKAP7Q9P0M2 348 aaPredicted RBP17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 LRIT1Q9P2V4 623 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 RALYQ9UKM9 306 aaKnown RBP17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 CHKBQ9Y259 395 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 HEY1Q9Y5J3 304 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 CACNA1GO43497 2377 aa17.03■□□□□ 0.32
TNFRSF4-202ENST00000453580 ANKRD66B4E2M5 251 aa17.02■□□□□ 0.32
TNFRSF4-202ENST00000453580 JCHAINP01591 159 aa17.02■□□□□ 0.32
TNFRSF4-202ENST00000453580 KRT1P04264 644 aa17.02■□□□□ 0.32
TNFRSF4-202ENST00000453580 HLA-DQB2P05538 268 aa17.02■□□□□ 0.32
TNFRSF4-202ENST00000453580 ITGA2BP08514 1039 aa17.02■□□□□ 0.32
TNFRSF4-202ENST00000453580 CCKBRP32239 447 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms