RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 NEK3P51956 506 aa2.13□□□□□ -2.07
LRCH3-209ENST00000452660 PDE1BQ01064 536 aa2.13□□□□□ -2.07
LRCH3-209ENST00000452660 FOXD4Q12950 439 aaPredicted RBP2.13□□□□□ -2.07
LRCH3-209ENST00000452660 EFR3AQ14156 821 aa2.13□□□□□ -2.07
LRCH3-209ENST00000452660 FAM83BQ5T0W9 1011 aa2.13□□□□□ -2.07
LRCH3-209ENST00000452660 SERTAD4-AS1Q5TG53 156 aa2.13□□□□□ -2.07
LRCH3-209ENST00000452660 ZNF704Q6ZNC4 412 aaPredicted RBP2.13□□□□□ -2.07
LRCH3-209ENST00000452660 ZNF440Q8IYI8 595 aa2.13□□□□□ -2.07
LRCH3-209ENST00000452660 SRBD1Q8N5C6 995 aaKnown RBP2.13□□□□□ -2.07
LRCH3-209ENST00000452660 THAP6Q8TBB0 222 aa2.13□□□□□ -2.07
LRCH3-209ENST00000452660 NOC3LQ8WTT2 800 aaKnown RBP2.13□□□□□ -2.07
LRCH3-209ENST00000452660 TAAR8Q969N4 342 aa2.13□□□□□ -2.07
LRCH3-209ENST00000452660 ZNF689Q96CS4 500 aaPredicted RBP2.13□□□□□ -2.07
LRCH3-209ENST00000452660 RBM17Q96I25 401 aaKnown RBP2.13□□□□□ -2.07
LRCH3-209ENST00000452660 TRIM15Q9C019 465 aa2.13□□□□□ -2.07
LRCH3-209ENST00000452660 LMAN2LQ9H0V9 348 aa2.13□□□□□ -2.07
LRCH3-209ENST00000452660 EPHX3Q9H6B9 360 aa2.13□□□□□ -2.07
LRCH3-209ENST00000452660 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.13□□□□□ -2.07
LRCH3-209ENST00000452660 ABHD14A-ACY1A0A1B0GW23 586 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 SH2D7A6NKC9 451 aaPredicted RBP2.12□□□□□ -2.07
LRCH3-209ENST00000452660 SLCO1B7G3V0H7 640 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 ANP32CO43423 234 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 WEE2P0C1S8 567 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 MYOD1P15172 320 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 ZNF26P17031 533 aaPredicted RBP2.12□□□□□ -2.07
LRCH3-209ENST00000452660 GPD2P43304 727 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 PRKAA2P54646 552 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 CLDN2P57739 230 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 TCTN1Q2MV58 587 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 WDR38Q5JTN6 314 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 SIRPB2Q5JXA9 342 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 FRG2Q64ET8 278 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 ANKRD54Q6NXT1 300 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 XRRA1Q6P2D8 792 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 GGT6Q6P531 493 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 KRTAP5-2Q701N4 177 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 ZNF34Q8IZ26 560 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 TMEM57Q8N5G2 664 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 STPG4Q8N801 248 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 C11orf65Q8NCR3 313 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 SVIPQ8NHG7 77 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 FGFBP3Q8TAT2 258 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 SPPL3Q8TCT6 385 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 PIGTQ969N2 578 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 LTV1Q96GA3 475 aaPredicted RBP2.12□□□□□ -2.07
LRCH3-209ENST00000452660 POM121L2Q96KW2 1035 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 QRFPRQ96P65 431 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 CLSTN3Q9BQT9 956 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 TRIM51Q9BSJ1 452 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 TFB2MQ9H5Q4 396 aaKnown RBP2.12□□□□□ -2.07
LRCH3-209ENST00000452660 CHODLQ9H9P2 273 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 NOD2Q9HC29 1040 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 MMP25Q9NPA2 562 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 TLR8Q9NR97 1041 aaKnown RBP2.12□□□□□ -2.07
LRCH3-209ENST00000452660 RCOR1Q9UKL0 485 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 FAF1Q9UNN5 650 aaPredicted RBP2.12□□□□□ -2.07
LRCH3-209ENST00000452660 LOXL2Q9Y4K0 774 aa2.12□□□□□ -2.07
LRCH3-209ENST00000452660 EIF4G1Q04637 1599 aaKnown RBP2.11□□□□□ -2.07
LRCH3-209ENST00000452660 A0A1W2PNU3 283 aaPredicted RBP2.11□□□□□ -2.07
LRCH3-209ENST00000452660 PABPN1LA6NDY0 278 aaKnown RBP2.11□□□□□ -2.07
LRCH3-209ENST00000452660 TMEM202A6NGA9 273 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 PER2O15055 1255 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 ZNHIT1O43257 154 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 TSPAN3O60637 253 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 CAVIN2O95810 425 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 MT-CYBP00156 380 aaPredicted RBP2.11□□□□□ -2.07
LRCH3-209ENST00000452660 HEXAP06865 529 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 CNPP09543 421 aaKnown RBP2.11□□□□□ -2.07
LRCH3-209ENST00000452660 FAM106CPP0CH98 169 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 CORO1AP31146 461 aaKnown RBP2.11□□□□□ -2.07
LRCH3-209ENST00000452660 HOXA13P31271 388 aaPredicted RBP2.11□□□□□ -2.07
LRCH3-209ENST00000452660 GABRB2P47870 512 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 CSRP3P50461 194 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 SLC8A3P57103 927 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 MRPS5P82675 430 aaKnown RBP2.11□□□□□ -2.07
LRCH3-209ENST00000452660 RPL24P83731 157 aaKnown RBP2.11□□□□□ -2.07
LRCH3-209ENST00000452660 HIST2H2ACQ16777 129 aaPredicted RBP2.11□□□□□ -2.07
LRCH3-209ENST00000452660 MMEL1Q495T6 779 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 SGO1Q5FBB7 561 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 XKR6Q5GH73 641 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 GGNBP1Q5YKI7 109 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 TTI2Q6NXR4 508 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 BRAT1Q6PJG6 821 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 SUSD1Q6UWL2 747 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 SLC36A4Q6YBV0 504 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 PLEKHM3Q6ZWE6 761 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 SLC46A3Q7Z3Q1 461 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 FAM160B2Q86V87 743 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 P2RY8Q86VZ1 359 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 AMER3Q8N944 861 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 CEP70Q8NHQ1 597 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 FAM222BQ8WU58 562 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 ARHGEF26Q96DR7 871 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 STAMBPL1Q96FJ0 436 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 SIN3AQ96ST3 1273 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 MPHOSPH8Q99549 860 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 POLR3CQ9BUI4 534 aaPredicted RBP2.11□□□□□ -2.07
LRCH3-209ENST00000452660 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.11□□□□□ -2.07
LRCH3-209ENST00000452660 MCRIP2Q9BUT9 160 aaKnown RBP2.11□□□□□ -2.07
LRCH3-209ENST00000452660 MAGEE1Q9HCI5 957 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms