RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 ZC3HC1Q86WB0 502 aaKnown RBP4.04□□□□□ -1.76
VPS8-211ENST00000452140 TEX11Q8IYF3 940 aa4.04□□□□□ -1.76
VPS8-211ENST00000452140 ADGRF2Q8IZF7 708 aa4.04□□□□□ -1.76
VPS8-211ENST00000452140 DSELQ8IZU8 1212 aa4.04□□□□□ -1.76
VPS8-211ENST00000452140 PELI3Q8N2H9 469 aa4.04□□□□□ -1.76
VPS8-211ENST00000452140 SPATA6LQ8N4H0 392 aa4.04□□□□□ -1.76
VPS8-211ENST00000452140 PRR26Q8N8Z3 221 aa4.04□□□□□ -1.76
VPS8-211ENST00000452140 HJURPQ8NCD3 748 aaPredicted RBP4.04□□□□□ -1.76
VPS8-211ENST00000452140 SMG7Q92540 1137 aaKnown RBP4.04□□□□□ -1.76
VPS8-211ENST00000452140 RND1Q92730 232 aa4.04□□□□□ -1.76
VPS8-211ENST00000452140 ACOX2Q99424 681 aa4.04□□□□□ -1.76
VPS8-211ENST00000452140 MAK16Q9BXY0 300 aaKnown RBP4.04□□□□□ -1.76
VPS8-211ENST00000452140 DCLK3Q9C098 648 aa4.04□□□□□ -1.76
VPS8-211ENST00000452140 CCDC68Q9H2F9 335 aa4.04□□□□□ -1.76
VPS8-211ENST00000452140 PLK3Q9H4B4 646 aa4.04□□□□□ -1.76
VPS8-211ENST00000452140 NOX4Q9NPH5 578 aa4.04□□□□□ -1.76
VPS8-211ENST00000452140 FBXL17Q9UF56 701 aa4.04□□□□□ -1.76
VPS8-211ENST00000452140 NENFQ9UMX5 172 aa4.04□□□□□ -1.76
VPS8-211ENST00000452140 MTMR6Q9Y217 621 aa4.04□□□□□ -1.76
VPS8-211ENST00000452140 RABGAP1Q9Y3P9 1069 aa4.04□□□□□ -1.76
VPS8-211ENST00000452140 hDV102S1A0JD36 115 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 ATP2A1O14983 1001 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 TPPPO94811 219 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 KCNK5O95279 499 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 TUBBP07437 444 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 CDK4P11802 303 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 CD58P19256 250 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 MAOAP21397 527 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 SCP2P22307 547 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 GPTP24298 496 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 ITGB8P26012 769 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 C21orf33P30042 268 aaPredicted RBP4.03□□□□□ -1.76
VPS8-211ENST00000452140 HNRNPH1P31943 449 aaKnown RBP4.03□□□□□ -1.76
VPS8-211ENST00000452140 PCYT1AP49585 367 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 CAMPP49913 170 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 METAP2P50579 478 aaKnown RBP eCLIP4.03□□□□□ -1.76
VPS8-211ENST00000452140 DDR1Q08345 913 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 IKQ13123 557 aaPredicted RBP4.03□□□□□ -1.76
VPS8-211ENST00000452140 SLC36A4Q6YBV0 504 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 FJX1Q86VR8 437 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 RPAP2Q8IXW5 612 aaPredicted RBP4.03□□□□□ -1.76
VPS8-211ENST00000452140 TAGAPQ8N103 731 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 FCRL4Q96PJ5 515 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 GAD1Q99259 594 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 SF3B5Q9BWJ5 86 aaKnown RBP4.03□□□□□ -1.76
VPS8-211ENST00000452140 PIGMQ9H3S5 423 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 MRPL44Q9H9J2 332 aaKnown RBP4.03□□□□□ -1.76
VPS8-211ENST00000452140 CNGB3Q9NQW8 809 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 IL36RNQ9UBH0 155 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 MYO6Q9UM54 1294 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 CLIC4Q9Y696 253 aa4.03□□□□□ -1.76
VPS8-211ENST00000452140 CD8B2A6NJW9 211 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 FIBPO43427 364 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 NDUFS7O75251 213 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 TSPAN9O75954 239 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 CH25HO95992 272 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 EGFP01133 1207 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 ANXA7P20073 488 aaKnown RBP4.02□□□□□ -1.77
VPS8-211ENST00000452140 AMTP48728 403 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 ACSM2AQ08AH3 577 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 Q0VFX4 171 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 RAB41Q5JT25 222 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 LRCH2Q5VUJ6 765 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 GGNBP1Q5YKI7 109 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 TMEM198Q66K66 360 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 ACSM2BQ68CK6 577 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 SIGIRRQ6IA17 410 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 CFAP77Q6ZQR2 320 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 TICAM1Q8IUC6 712 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 FOXRED2Q8IWF2 684 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 CCDC89Q8N998 374 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 OR14A16Q8NHC5 309 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 HMGCLL1Q8TB92 370 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 GRAMD2BQ96HH9 432 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 NAF1Q96HR8 494 aaKnown RBP4.02□□□□□ -1.77
VPS8-211ENST00000452140 HARBI1Q96MB7 349 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 LRFN5Q96NI6 719 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 CSF3RQ99062 836 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 NCAPGQ9BPX3 1015 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 SEBOXQ9HB31 216 aaPredicted RBP4.02□□□□□ -1.77
VPS8-211ENST00000452140 MMP25Q9NPA2 562 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 ACSS1Q9NUB1 689 aaPredicted RBP4.02□□□□□ -1.77
VPS8-211ENST00000452140 OGFRQ9NZT2 677 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 CWC15Q9P013 229 aaKnown RBP4.02□□□□□ -1.77
VPS8-211ENST00000452140 TINAGQ9UJW2 476 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 RPS6KA6Q9UK32 745 aa4.02□□□□□ -1.77
VPS8-211ENST00000452140 TTC7AQ9ULT0 858 aaPredicted RBP4.02□□□□□ -1.77
VPS8-211ENST00000452140 B4DLN1 442 aa4.01□□□□□ -1.77
VPS8-211ENST00000452140 SOCS6O14544 535 aa4.01□□□□□ -1.77
VPS8-211ENST00000452140 CTDSP2O14595 271 aa4.01□□□□□ -1.77
VPS8-211ENST00000452140 SCAMP1O15126 338 aa4.01□□□□□ -1.77
VPS8-211ENST00000452140 HS6ST1O60243 411 aa4.01□□□□□ -1.77
VPS8-211ENST00000452140 JRKO75564 520 aa4.01□□□□□ -1.77
VPS8-211ENST00000452140 STARD3NLO95772 234 aa4.01□□□□□ -1.77
VPS8-211ENST00000452140 SRPRAP08240 638 aaKnown RBP4.01□□□□□ -1.77
VPS8-211ENST00000452140 CDC25AP30304 524 aa4.01□□□□□ -1.77
VPS8-211ENST00000452140 SSTR2P30874 369 aa4.01□□□□□ -1.77
VPS8-211ENST00000452140 HOXD3P31249 432 aaPredicted RBP4.01□□□□□ -1.77
VPS8-211ENST00000452140 STX2P32856 288 aa4.01□□□□□ -1.77
VPS8-211ENST00000452140 MRPL12P52815 198 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms