RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 CA4P22748 312 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 KELP23276 732 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 CYLC1P35663 651 aaPredicted RBP9.67□□□□□ -0.86
USP54-207ENST00000451492 GPR1P46091 355 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 GNPDA1P46926 289 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 POLD2P49005 469 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 MARCKSL1P49006 195 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 RPIAP49247 311 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 NAP1L1P55209 391 aaKnown RBP9.67□□□□□ -0.86
USP54-207ENST00000451492 PPIDQ08752 370 aaKnown RBP9.67□□□□□ -0.86
USP54-207ENST00000451492 SPA17Q15506 151 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 COL28A1Q2UY09 1125 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 RALGPS1Q5JS13 557 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 SLC9A4Q6AI14 798 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 MARK2Q7KZI7 788 aaKnown RBP9.67□□□□□ -0.86
USP54-207ENST00000451492 SDR16C5Q8N3Y7 309 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 ARL10Q8N8L6 244 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 DCBLD1Q8N8Z6 715 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 ARRDC2Q8TBH0 407 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 SCG3Q8WXD2 468 aaKnown RBP9.67□□□□□ -0.86
USP54-207ENST00000451492 SCAMP4Q969E2 229 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 CCDC74AQ96AQ1 378 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 AP2M1Q96CW1 435 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 SCRN2Q96FV2 425 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 NAF1Q96HR8 494 aaKnown RBP9.67□□□□□ -0.86
USP54-207ENST00000451492 MCCC1Q96RQ3 725 aaPredicted RBP9.67□□□□□ -0.86
USP54-207ENST00000451492 USP29Q9HBJ7 922 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 PHPT1Q9NRX4 125 aaPredicted RBP9.67□□□□□ -0.86
USP54-207ENST00000451492 NCKIPSDQ9NZQ3 722 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 SAE1Q9UBE0 346 aaPredicted RBP9.67□□□□□ -0.86
USP54-207ENST00000451492 RABGEF1Q9UJ41 708 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 LHX6Q9UPM6 363 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 PCDHA13Q9Y5I0 950 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 ASXL3Q9C0F0 2248 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 ITPR1Q14643 2758 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 MACROD2A1Z1Q3 448 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 PSTPIP1O43586 416 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 TLX3O43711 291 aaPredicted RBP9.66□□□□□ -0.86
USP54-207ENST00000451492 CST8O60676 142 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 MMP2P08253 660 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 PECAM1P16284 738 aaPredicted RBP9.66□□□□□ -0.86
USP54-207ENST00000451492 AK4P27144 223 aaPredicted RBP9.66□□□□□ -0.86
USP54-207ENST00000451492 SLC1A1P43005 524 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 GABREP78334 506 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 SKOR1P84550 965 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 CDK3Q00526 305 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 SPIDRQ14159 915 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 PDK1Q15118 436 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 CDCP2Q5VXM1 449 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 ALS2CLQ60I27 953 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 ALG1LQ6GMV1 187 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 SLC30A9Q6PML9 568 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 SPOCD1Q6ZMY3 1216 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 DAAM2Q86T65 1068 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 ZC3H18Q86VM9 953 aaKnown RBP9.66□□□□□ -0.86
USP54-207ENST00000451492 GAS2L3Q86XJ1 694 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 Q8N9G6 341 aaPredicted RBP9.66□□□□□ -0.86
USP54-207ENST00000451492 ACRBPQ8NEB7 543 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 FAM46DQ8NEK8 389 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 ATXN7L3BQ96GX2 97 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 CRELD1Q96HD1 420 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 TBATAQ96M53 351 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 TSGA13Q96PP4 275 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 AGAP2Q99490 1192 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 ABCG8Q9H221 673 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 DPEP2Q9H4A9 486 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 WDR70Q9NW82 654 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 UBP1Q9NZI7 540 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 INTUQ9ULD6 942 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 SUFUQ9UMX1 484 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 TMEM98Q9Y2Y6 226 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 GPSM3Q9Y4H4 160 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 ALG6Q9Y672 507 aa9.66□□□□□ -0.86
USP54-207ENST00000451492 LOC400499M0QZD8 3231 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 PMS2P1A4D2B8 440 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 PSMD11O00231 422 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 IPO7O95373 1038 aaKnown RBP9.65□□□□□ -0.86
USP54-207ENST00000451492 ASMTLO95671 621 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 MT-CYBP00156 380 aaPredicted RBP9.65□□□□□ -0.86
USP54-207ENST00000451492 SOD1P00441 154 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 PRLP01236 227 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 RPLP0P05388 317 aaKnown RBP9.65□□□□□ -0.86
USP54-207ENST00000451492 CEACAM5P06731 702 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 ZFXP17010 805 aaPredicted RBP9.65□□□□□ -0.86
USP54-207ENST00000451492 ZNF30P17039 623 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 TRIM23P36406 574 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 CDKN2BP42772 138 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 PPM1FP49593 454 aaPredicted RBP9.65□□□□□ -0.86
USP54-207ENST00000451492 MAZP56270 477 aaKnown RBP9.65□□□□□ -0.86
USP54-207ENST00000451492 IFI35P80217 286 aaPredicted RBP9.65□□□□□ -0.86
USP54-207ENST00000451492 PTSQ03393 145 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 ADCY2Q08462 1091 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 CCDC173Q0VFZ6 552 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 QPCTQ16769 361 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 LRRC38Q5VT99 294 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 RBM44Q6ZP01 1051 aaKnown RBP9.65□□□□□ -0.86
USP54-207ENST00000451492 LYSMD3Q7Z3D4 306 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 TECPR1Q7Z6L1 1165 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 CCDC170Q8IYT3 715 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 CNTD1Q8N815 330 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms