RNA–Protein interactions for RNA: ENST00000448526.6

CDKN1A-204, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDKN1A, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-204ENST00000448526 SMPD4Q9NXE4 827 aa17.07■□□□□ 0.32
CDKN1A-204ENST00000448526 IKZF3Q9UKT9 509 aa17.07■□□□□ 0.32
CDKN1A-204ENST00000448526 CORO1CQ9ULV4 474 aaPredicted RBP17.07■□□□□ 0.32
CDKN1A-204ENST00000448526 TBC1D30Q9Y2I9 924 aa17.07■□□□□ 0.32
CDKN1A-204ENST00000448526 LRCH1Q9Y2L9 728 aa17.07■□□□□ 0.32
CDKN1A-204ENST00000448526 TRAF6Q9Y4K3 522 aa17.07■□□□□ 0.32
CDKN1A-204ENST00000448526 UBA6A0AVT1 1052 aaPredicted RBP17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 STX16-NPEPL1H3BU86 382 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 UBXN8O00124 270 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 FKTNO75072 461 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 SIX3O95343 332 aaPredicted RBP17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 CRTAMO95727 393 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 ENO3P13929 434 aaPredicted RBP17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 MTHFD2P13995 350 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 MSX2P35548 267 aaPredicted RBP17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 NFKB2Q00653 900 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 CHST9Q7L1S5 443 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 TMCO2Q7Z6W1 182 aaPredicted RBP17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 SDCCAG8Q86SQ7 713 aaPredicted RBP17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 DHDDSQ86SQ9 333 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 LPCAT1Q8NF37 534 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 LPGAT1Q92604 370 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 JADE3Q92613 823 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 FAR2Q96K12 515 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 DEFB118Q96PH6 123 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 STK39Q9UEW8 545 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 PRPF19Q9UMS4 504 aaKnown RBP17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 RAI2Q9Y5P3 530 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 H3BNX3 289 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 CFLARO15519 480 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 SMNDC1O75940 238 aaKnown RBP eCLIP17.06■□□□□ 0.322e-6■■□□□ 11.4
CDKN1A-204ENST00000448526 FMO4P31512 558 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 INHBCP55103 352 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 PKNOX1P55347 436 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 HERVK_113P63132 956 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 RFTN1Q14699 578 aaPredicted RBP17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 TAF1AQ15573 450 aaPredicted RBP17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 ZNF423Q2M1K9 1284 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 PIGGQ5H8A4 983 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 IZUMO2Q6UXV1 221 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 KBTBD6Q86V97 674 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 PTGR2Q8N8N7 351 aaPredicted RBP17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 SNX31Q8N9S9 440 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 USP13Q92995 863 aaPredicted RBP17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 VWCEQ96DN2 955 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 SLC22A12Q96S37 553 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 ATOH8Q96SQ7 321 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 ERVK-6Q9BXR3 956 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 MUC3BQ9H195 1237 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 GALPQ9UBC7 116 aa17.06■□□□□ 0.32
CDKN1A-204ENST00000448526 LIN7AO14910 233 aaPredicted RBP17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 MT-CO1P00395 513 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 PENKP01210 267 aaPredicted RBP17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 XRCC1P18887 633 aaPredicted RBP17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 MZF1P28698 734 aaPredicted RBP17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 PDAP1Q13442 181 aaKnown RBP17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 CEACAM7Q14002 265 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 PAQR3Q6TCH7 311 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 BNC2Q6ZN30 1099 aaPredicted RBP17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 TMEM150AQ86TG1 271 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 PGAM4Q8N0Y7 254 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 ZFRQ96KR1 1074 aaKnown RBP17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 C3orf30Q96M34 536 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 WDR41Q9HAD4 459 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 POPDC3Q9HBV1 291 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 INTS10Q9NVR2 710 aaKnown RBP17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 FAM50BQ9Y247 325 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 SMIM24O75264 130 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 TMCC1O94876 653 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 HSPA1AP0DMV8 641 aaKnown RBP17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 HSPA1BP0DMV9 641 aaKnown RBP17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 HDCP19113 662 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 PSMA3P25788 255 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 SH3BP2P78314 561 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 TRAF2Q12933 501 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 CDC16Q13042 620 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 ZRSR2Q15696 482 aaKnown RBP17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 UGT3A2Q3SY77 523 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 LPCAT4Q643R3 524 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 AFTPHQ6ULP2 937 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 PIANPQ8IYJ0 282 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 RNF148Q8N7C7 305 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 MIEF2Q96C03 454 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 NSUN5Q96P11 429 aaKnown RBP17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 ECSITQ9BQ95 431 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 TRMOQ9BU70 441 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 EFCAB1Q9HAE3 211 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 ARIH1Q9Y4X5 557 aaPredicted RBP17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 TRIM17Q9Y577 477 aa17.05■□□□□ 0.32
CDKN1A-204ENST00000448526 MKI67P46013 3256 aaKnown RBP17.04■□□□□ 0.32
CDKN1A-204ENST00000448526 PLXNA4Q9HCM2 1894 aa17.04■□□□□ 0.32
CDKN1A-204ENST00000448526 ATP6AP2A0A1C7CYW4 349 aa17.04■□□□□ 0.32
CDKN1A-204ENST00000448526 ATP6AP2O75787 350 aa17.04■□□□□ 0.32
CDKN1A-204ENST00000448526 RHOBTB1O94844 696 aa17.04■□□□□ 0.32
CDKN1A-204ENST00000448526 CDK14O94921 469 aa17.04■□□□□ 0.32
CDKN1A-204ENST00000448526 C1RP00736 705 aa17.04■□□□□ 0.32
CDKN1A-204ENST00000448526 SOD2P04179 222 aa17.04■□□□□ 0.32
CDKN1A-204ENST00000448526 RAG1P15918 1043 aa17.04■□□□□ 0.32
CDKN1A-204ENST00000448526 HOXB8P17481 243 aaPredicted RBP17.04■□□□□ 0.32
CDKN1A-204ENST00000448526 ALDH1A3P47895 512 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms