RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 C19orf43Q9BQ61 176 aa19.51■□□□□ 0.71
SGCE-207ENST00000447873 SUDS3Q9H7L9 328 aaPredicted RBP19.51■□□□□ 0.71
SGCE-207ENST00000447873 VIPAS39Q9H9C1 493 aa19.51■□□□□ 0.71
SGCE-207ENST00000447873 PKD2L2Q9NZM6 624 aa19.51■□□□□ 0.71
SGCE-207ENST00000447873 FNDC3AQ9Y2H6 1198 aaKnown RBP19.51■□□□□ 0.71
SGCE-207ENST00000447873 BPTFQ12830 3046 aa19.5■□□□□ 0.71
SGCE-207ENST00000447873 SLC7A4O43246 635 aa19.5■□□□□ 0.71
SGCE-207ENST00000447873 PIAS1O75925 651 aa19.5■□□□□ 0.71
SGCE-207ENST00000447873 C1SP09871 688 aa19.5■□□□□ 0.71
SGCE-207ENST00000447873 PSMA3P25788 255 aa19.5■□□□□ 0.71
SGCE-207ENST00000447873 ARNTP27540 789 aa19.5■□□□□ 0.71
SGCE-207ENST00000447873 THOC5Q13769 683 aaKnown RBP19.5■□□□□ 0.71
SGCE-207ENST00000447873 TMEM52BQ4KMG9 183 aa19.5■□□□□ 0.71
SGCE-207ENST00000447873 ANO7Q6IWH7 933 aa19.5■□□□□ 0.71
SGCE-207ENST00000447873 ZNF449Q6P9G9 518 aa19.5■□□□□ 0.71
SGCE-207ENST00000447873 LIPIQ6XZB0 460 aa19.5■□□□□ 0.71
SGCE-207ENST00000447873 HSD11B1LQ7Z5J1 315 aa19.5■□□□□ 0.71
SGCE-207ENST00000447873 RASSF3Q86WH2 238 aa19.5■□□□□ 0.71
SGCE-207ENST00000447873 CXorf40AQ8TE69 158 aa19.5■□□□□ 0.71
SGCE-207ENST00000447873 HHIPQ96QV1 700 aa19.5■□□□□ 0.71
SGCE-207ENST00000447873 ZFATQ9P243 1243 aa19.5■□□□□ 0.71
SGCE-207ENST00000447873 FKBPLQ9UIM3 349 aa19.5■□□□□ 0.71
SGCE-207ENST00000447873 FZD4Q9ULV1 537 aa19.5■□□□□ 0.71
SGCE-207ENST00000447873 LRRK1Q38SD2 2015 aa19.5■□□□□ 0.71
SGCE-207ENST00000447873 CCDC162PA2VCL2 907 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 FAM159BA6NKW6 160 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 GOLGA8CPA6NN73 597 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 PSMD11O00231 422 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 TSPAN6O43657 245 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 AP1G1O43747 822 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 PDGFBP01127 241 aaPredicted RBP19.49■□□□□ 0.71
SGCE-207ENST00000447873 EIF3BP55884 814 aaKnown RBP19.49■□□□□ 0.71
SGCE-207ENST00000447873 TAS2R38P59533 333 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 MTAPQ13126 283 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 EFTUD2Q15029 972 aaKnown RBP eCLIP19.49■□□□□ 0.71
SGCE-207ENST00000447873 ZDHHC20Q5W0Z9 365 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 CBARPQ8N350 705 aaPredicted RBP19.49■□□□□ 0.71
SGCE-207ENST00000447873 PPM1NQ8N819 430 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 OR14C36Q8NHC7 312 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 FAM131CQ96AQ9 280 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 RUFY1Q96T51 708 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 IARS2Q9NSE4 1012 aaKnown RBP19.49■□□□□ 0.71
SGCE-207ENST00000447873 NFS1Q9Y697 457 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 ZNF106Q9H2Y7 1883 aaKnown RBP19.49■□□□□ 0.71
SGCE-207ENST00000447873 POC1B-GALNT4F8VUJ3 575 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 H7C0S8 307 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 MAP2K7O14733 419 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 PCDH8O95206 1070 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 GOT2P00505 430 aaKnown RBP19.49■□□□□ 0.71
SGCE-207ENST00000447873 C1QAP02745 245 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 IVLP07476 585 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 BPIP17213 487 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 MC4RP32245 332 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 SPAM1P38567 509 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 SPINT3P49223 89 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 TPMTP51580 245 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 ACOX1Q15067 660 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 CWF19L1Q69YN2 538 aaKnown RBP19.49■□□□□ 0.71
SGCE-207ENST00000447873 NEPROQ6NW34 567 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 AFTPHQ6ULP2 937 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 LRIG3Q6UXM1 1119 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 PTAR1Q7Z6K3 402 aaPredicted RBP19.49■□□□□ 0.71
SGCE-207ENST00000447873 FAM124AQ86V42 546 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 LRRC6Q86X45 466 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 OR4L1Q8NH43 312 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 GABPB2Q8TAK5 448 aaPredicted RBP19.49■□□□□ 0.71
SGCE-207ENST00000447873 CALML6Q8TD86 181 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 MRRFQ96E11 262 aaKnown RBP19.49■□□□□ 0.71
SGCE-207ENST00000447873 FAM167BQ9BTA0 163 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 IER2Q9BTL4 223 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 SMYD2Q9NRG4 433 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 RAD18Q9NS91 495 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 VPS18Q9P253 973 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 APPL1Q9UKG1 709 aa19.49■□□□□ 0.71
SGCE-207ENST00000447873 RGSL1A5PLK6 1076 aa19.48■□□□□ 0.71
SGCE-207ENST00000447873 OR51F1A6NGY5 319 aa19.48■□□□□ 0.71
SGCE-207ENST00000447873 CXorf49A8MYA2 514 aaPredicted RBP19.48■□□□□ 0.71
SGCE-207ENST00000447873 PLRG1O43660 514 aaKnown RBP19.48■□□□□ 0.71
SGCE-207ENST00000447873 MMP20O60882 483 aa19.48■□□□□ 0.71
SGCE-207ENST00000447873 SASH3O75995 380 aa19.48■□□□□ 0.71
SGCE-207ENST00000447873 ETV3P41162 512 aa19.48■□□□□ 0.71
SGCE-207ENST00000447873 MAGEA9P43362 315 aa19.48■□□□□ 0.71
SGCE-207ENST00000447873 PTPN5P54829 565 aa19.48■□□□□ 0.71
SGCE-207ENST00000447873 Q6ZVL8 140 aa19.48■□□□□ 0.71
SGCE-207ENST00000447873 OTUD6BQ8N6M0 293 aa19.48■□□□□ 0.71
SGCE-207ENST00000447873 ITM2CQ9NQX7 267 aa19.48■□□□□ 0.71
SGCE-207ENST00000447873 IKBKGQ9Y6K9 419 aa19.48■□□□□ 0.71
SGCE-207ENST00000447873 TECTAO75443 2155 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 TRPM6Q9BX84 2022 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 GLYATL1P3A0A0U1RQE8 302 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 CD3EAPO15446 510 aaKnown RBP19.47■□□□□ 0.71
SGCE-207ENST00000447873 ATP8B1O43520 1251 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 LZTS3O60299 673 aaPredicted RBP19.47■□□□□ 0.71
SGCE-207ENST00000447873 APBB3O95704 486 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 C6P13671 934 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 MSH2P43246 934 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 ADPRHP54922 357 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 ZNF844Q08AG5 666 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 NAB1Q13506 487 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 CEP85LQ5SZL2 805 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms