RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 KIAA0895LQ68EN5 471 aa17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 KIAA1161Q6NSJ0 714 aa17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 CENPUQ71F23 418 aa17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 STAMBPL1Q96FJ0 436 aa17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 CFAP36Q96G28 342 aa17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 FMO2Q99518 471 aa17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 PARD6BQ9BYG5 372 aa17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 SOX13Q9UN79 622 aa17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 FNDC3AQ9Y2H6 1198 aaKnown RBP17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 TNRC6BQ9UPQ9 1833 aaKnown RBP17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 TM7SF2O76062 418 aa17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 BPIP17213 487 aa17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 TNFRSF8P28908 595 aa17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 HMGCLP35914 325 aa17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 SPINT3P49223 89 aa17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 RPL6Q02878 288 aaKnown RBP17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 ALS2CLQ60I27 953 aa17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 ESRP1Q6NXG1 681 aaKnown RBP17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 NEK5Q6P3R8 708 aa17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 SLC36A4Q6YBV0 504 aa17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 CCNI2Q6ZMN8 369 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 TECPR1Q7Z6L1 1165 aa17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 TRIM69Q86WT6 500 aa17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 ZBED8Q8IZ13 594 aa17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 GPR161Q8N6U8 529 aaKnown RBP17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 FBXO36Q8NEA4 188 aa17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 RUBCNQ92622 972 aa17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 NELL1Q92832 810 aa17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 EBNA1BP2Q99848 306 aaKnown RBP17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 MYOCQ99972 504 aa17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 KIFC1Q9BW19 673 aa17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 FOXP3Q9BZS1 431 aa17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 PKD2L2Q9NZM6 624 aa17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 FKBPLQ9UIM3 349 aa17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 PKP3Q9Y446 797 aa17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 TEX264Q9Y6I9 313 aa17.96■□□□□ 0.47
TRAPPC4-203ENST00000447216 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 C10orf142B7Z368 130 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 PSMD11O00231 422 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 WNT9AO14904 365 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 EIF3HO15372 352 aaKnown RBP eCLIP17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 SLC31A1O15431 190 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 HRO43593 1189 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 RPP40O75818 363 aaKnown RBP17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 PAK4O96013 591 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 IGHV4-34P06331 123 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 ARSDP51689 593 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 SMAD1Q15797 465 aaKnown RBP17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 ZNF528Q3MIS6 628 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 TMEFF1Q8IYR6 380 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 GPR26Q8NDV2 337 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 STYXQ8WUJ0 223 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 GAB3Q8WWW8 586 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 SNX19Q92543 992 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 ZNF669Q96BR6 464 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 NUS1Q96E22 293 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 MFSD3Q96ES6 412 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 DTD2Q96FN9 168 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 C9orf72Q96LT7 481 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 FCRL3Q96P31 734 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 C1QTNF2Q9BXJ5 285 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 FAM126AQ9BYI3 521 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 SLC17A9Q9BYT1 436 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 ABCG8Q9H221 673 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 EBF2Q9HAK2 575 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 MRM3Q9HC36 420 aaKnown RBP17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 FZD3Q9NPG1 666 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 NLE1Q9NVX2 485 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 ZSCAN32Q9NX65 697 aa17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 TP53BP1Q12888 1972 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC4-203ENST00000447216 DLL1O00548 723 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 PGAM1P18669 254 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 MAGEA4P43358 317 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 CCR5P51681 352 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 PDE1BQ01064 536 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 CBLBQ13191 982 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 SGCGQ13326 291 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 LAMB3Q13751 1172 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 ANKRD20A4Q4UJ75 823 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 WDR93Q6P2C0 686 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 KDM7AQ6ZMT4 941 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 CAPN12Q6ZSI9 719 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 ARMCX6Q7L4S7 300 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 SLC41A1Q8IVJ1 513 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 PELI3Q8N2H9 469 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 MYRIPQ8NFW9 859 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 OR13J1Q8NGT2 312 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 PTCD2Q8WV60 388 aaKnown RBP17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 SCAMP4Q969E2 229 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 BIRC7Q96CA5 298 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 LRRC39Q96DD0 335 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 TBATAQ96M53 351 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 SUDS3Q9H7L9 328 aaPredicted RBP17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 PLAC1Q9HBJ0 212 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 ZC3H7BQ9UGR2 993 aaKnown RBP17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 RPS6KL1Q9Y6S9 549 aa17.94■□□□□ 0.46
TRAPPC4-203ENST00000447216 PI4KAP42356 2102 aa17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 FAM237BA0A1B0GVD1 139 aa17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 OR51F1A6NGY5 319 aa17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 RAD51BO15315 384 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms