RNA–Protein interactions for RNA: ENST00000447009.1

APTR-205, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 2 BASIC

Gene APTR, Length 902 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-205ENST00000447009 PCDHB11Q9Y5F2 797 aa20.47■□□□□ 0.87
APTR-205ENST00000447009 NPIPB15A6NHN6 443 aaPredicted RBP20.46■□□□□ 0.87
APTR-205ENST00000447009 FAM87AP0C7U9 286 aa20.46■□□□□ 0.87
APTR-205ENST00000447009 CYP2A6P11509 494 aaPredicted RBP20.46■□□□□ 0.87
APTR-205ENST00000447009 CCL4P13236 92 aa20.46■□□□□ 0.87
APTR-205ENST00000447009 TCF4P15884 667 aa20.46■□□□□ 0.87
APTR-205ENST00000447009 CR2P20023 1033 aa20.46■□□□□ 0.87
APTR-205ENST00000447009 IL1R2P27930 398 aa20.46■□□□□ 0.87
APTR-205ENST00000447009 HCAR3P49019 387 aa20.46■□□□□ 0.87
APTR-205ENST00000447009 CYP4F2P78329 520 aa20.46■□□□□ 0.87
APTR-205ENST00000447009 CDK3Q00526 305 aa20.46■□□□□ 0.87
APTR-205ENST00000447009 NFKB2Q00653 900 aa20.46■□□□□ 0.87
APTR-205ENST00000447009 TMCO3Q6UWJ1 677 aa20.46■□□□□ 0.87
APTR-205ENST00000447009 ZNF571Q7Z3V5 609 aaPredicted RBP20.46■□□□□ 0.87
APTR-205ENST00000447009 TSPAN33Q86UF1 283 aa20.46■□□□□ 0.87
APTR-205ENST00000447009 CCDC74BQ96LY2 380 aa20.46■□□□□ 0.87
APTR-205ENST00000447009 AKAP7Q9P0M2 348 aaPredicted RBP20.46■□□□□ 0.87
APTR-205ENST00000447009 SCINQ9Y6U3 715 aa20.46■□□□□ 0.87
APTR-205ENST00000447009 TENM4Q6N022 2769 aa20.46■□□□□ 0.87
APTR-205ENST00000447009 PIEZO2Q9H5I5 2752 aa20.46■□□□□ 0.87
APTR-205ENST00000447009 ZFC3H1O60293 1989 aaKnown RBP20.45■□□□□ 0.86
APTR-205ENST00000447009 A0A0U1RQS6 177 aa20.45■□□□□ 0.86
APTR-205ENST00000447009 PEX11BO96011 259 aa20.45■□□□□ 0.86
APTR-205ENST00000447009 CTPS1P17812 591 aa20.45■□□□□ 0.86
APTR-205ENST00000447009 HSPA9P38646 679 aaKnown RBP20.45■□□□□ 0.86
APTR-205ENST00000447009 ARL4AP40617 200 aa20.45■□□□□ 0.86
APTR-205ENST00000447009 POLD2P49005 469 aa20.45■□□□□ 0.86
APTR-205ENST00000447009 ZNF135P52742 658 aaPredicted RBP20.45■□□□□ 0.86
APTR-205ENST00000447009 KCNC4Q03721 635 aa20.45■□□□□ 0.86
APTR-205ENST00000447009 Q6ZVL8 140 aa20.45■□□□□ 0.86
APTR-205ENST00000447009 ZNF438Q7Z4V0 828 aa20.45■□□□□ 0.86
APTR-205ENST00000447009 C17orf82Q86X59 251 aaPredicted RBP20.45■□□□□ 0.86
APTR-205ENST00000447009 ATPAF2Q8N5M1 289 aa20.45■□□□□ 0.86
APTR-205ENST00000447009 ZSCAN1Q8NBB4 408 aa20.45■□□□□ 0.86
APTR-205ENST00000447009 MGME1Q9BQP7 344 aa20.45■□□□□ 0.86
APTR-205ENST00000447009 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.45■□□□□ 0.86
APTR-205ENST00000447009 PHTF1Q9UMS5 762 aa20.45■□□□□ 0.86
APTR-205ENST00000447009 A0A1W2PQ67 120 aa20.44■□□□□ 0.86
APTR-205ENST00000447009 A0A1W2PQC6 194 aa20.44■□□□□ 0.86
APTR-205ENST00000447009 DDX3XO00571 662 aaKnown RBP eCLIP20.44■□□□□ 0.867e-9■■■■□ 20
APTR-205ENST00000447009 WISP1O95388 367 aa20.44■□□□□ 0.86
APTR-205ENST00000447009 ITGB2P05107 769 aa20.44■□□□□ 0.86
APTR-205ENST00000447009 NFKBIAP25963 317 aa20.44■□□□□ 0.86
APTR-205ENST00000447009 CTBSQ01459 385 aa20.44■□□□□ 0.86
APTR-205ENST00000447009 DPYSL2Q16555 572 aa20.44■□□□□ 0.86
APTR-205ENST00000447009 TMEM164Q5U3C3 297 aa20.44■□□□□ 0.86
APTR-205ENST00000447009 NKAIN2Q5VXU1 208 aa20.44■□□□□ 0.86
APTR-205ENST00000447009 ZNF574Q6ZN55 896 aaPredicted RBP20.44■□□□□ 0.86
APTR-205ENST00000447009 DTX1Q86Y01 620 aa20.44■□□□□ 0.86
APTR-205ENST00000447009 BBS5Q8N3I7 341 aa20.44■□□□□ 0.86
APTR-205ENST00000447009 SPOCK2Q92563 424 aa20.44■□□□□ 0.86
APTR-205ENST00000447009 PMEPA1Q969W9 287 aa20.44■□□□□ 0.86
APTR-205ENST00000447009 COL26A1Q96A83 441 aa20.44■□□□□ 0.86
APTR-205ENST00000447009 ZMYND15Q9H091 742 aa20.44■□□□□ 0.86
APTR-205ENST00000447009 TRNAU1APQ9NX07 287 aaKnown RBP20.44■□□□□ 0.86
APTR-205ENST00000447009 KCTD5Q9NXV2 234 aa20.44■□□□□ 0.86
APTR-205ENST00000447009 CD84Q9UIB8 345 aa20.44■□□□□ 0.86
APTR-205ENST00000447009 PLEKHM1Q9Y4G2 1056 aa20.44■□□□□ 0.86
APTR-205ENST00000447009 ST14Q9Y5Y6 855 aa20.44■□□□□ 0.86
APTR-205ENST00000447009 IGHV5-10-1A0A0J9YXX1 117 aa20.43■□□□□ 0.86
APTR-205ENST00000447009 MAFKO60675 156 aa20.43■□□□□ 0.86
APTR-205ENST00000447009 PGLSO95336 258 aa20.43■□□□□ 0.86
APTR-205ENST00000447009 CD82P27701 267 aa20.43■□□□□ 0.86
APTR-205ENST00000447009 ADCY8P40145 1251 aa20.43■□□□□ 0.86
APTR-205ENST00000447009 ACTR1BP42025 376 aa20.43■□□□□ 0.86
APTR-205ENST00000447009 MMP13P45452 471 aa20.43■□□□□ 0.86
APTR-205ENST00000447009 ACTR1AP61163 376 aa20.43■□□□□ 0.86
APTR-205ENST00000447009 NR1D2Q14995 579 aa20.43■□□□□ 0.86
APTR-205ENST00000447009 ARMC12Q5T9G4 340 aa20.43■□□□□ 0.86
APTR-205ENST00000447009 RFLNAQ6ZTI6 216 aa20.43■□□□□ 0.86
APTR-205ENST00000447009 USP45Q70EL2 814 aa20.43■□□□□ 0.86
APTR-205ENST00000447009 POLNQ7Z5Q5 900 aa20.43■□□□□ 0.86
APTR-205ENST00000447009 NAGSQ8N159 534 aa20.43■□□□□ 0.86
APTR-205ENST00000447009 NSMCE1Q8WV22 266 aa20.43■□□□□ 0.86
APTR-205ENST00000447009 HTR3CQ8WXA8 447 aa20.43■□□□□ 0.86
APTR-205ENST00000447009 CSPG4P5Q96PW8 444 aa20.43■□□□□ 0.86
APTR-205ENST00000447009 RTN4Q9NQC3 1192 aaKnown RBP20.43■□□□□ 0.86
APTR-205ENST00000447009 MYO18BQ8IUG5 2567 aa20.42■□□□□ 0.86
APTR-205ENST00000447009 HGSO14964 777 aaPredicted RBP20.42■□□□□ 0.86
APTR-205ENST00000447009 IVLP07476 585 aa20.42■□□□□ 0.86
APTR-205ENST00000447009 GZMAP12544 262 aa20.42■□□□□ 0.86
APTR-205ENST00000447009 SKILP12757 684 aa20.42■□□□□ 0.86
APTR-205ENST00000447009 MPSTP25325 297 aa20.42■□□□□ 0.86
APTR-205ENST00000447009 CD1CP29017 333 aa20.42■□□□□ 0.86
APTR-205ENST00000447009 CSF2RBP32927 897 aa20.42■□□□□ 0.86
APTR-205ENST00000447009 PCK1P35558 622 aa20.42■□□□□ 0.86
APTR-205ENST00000447009 GPR1P46091 355 aa20.42■□□□□ 0.86
APTR-205ENST00000447009 TYRO3Q06418 890 aa20.42■□□□□ 0.86
APTR-205ENST00000447009 KLHL30Q0D2K2 578 aa20.42■□□□□ 0.86
APTR-205ENST00000447009 TBR1Q16650 682 aa20.42■□□□□ 0.86
APTR-205ENST00000447009 TXNRD3NBQ6F5E7 133 aa20.42■□□□□ 0.86
APTR-205ENST00000447009 TRIM74Q86UV6 250 aa20.42■□□□□ 0.86
APTR-205ENST00000447009 TRIM11Q96F44 468 aa20.42■□□□□ 0.86
APTR-205ENST00000447009 GBP4Q96PP9 640 aa20.42■□□□□ 0.86
APTR-205ENST00000447009 SMIM14Q96QK8 99 aa20.42■□□□□ 0.86
APTR-205ENST00000447009 OR2M4Q96R27 311 aa20.42■□□□□ 0.86
APTR-205ENST00000447009 CDH19Q9H159 772 aa20.42■□□□□ 0.86
APTR-205ENST00000447009 NT5MQ9NPB1 228 aa20.42■□□□□ 0.86
APTR-205ENST00000447009 SLC17A4Q9Y2C5 497 aa20.42■□□□□ 0.86
APTR-205ENST00000447009 TMEM98Q9Y2Y6 226 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms