RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 CACNB4O00305 520 aaPredicted RBP14.81□□□□□ -0.04
HDAC4-204ENST00000446876 TOR1BO14657 336 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 ENC1O14682 589 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 KCNN4O15554 427 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 NRDCO43847 1150 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 GCATO75600 419 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 ZNF30P17039 623 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 HTR1BP28222 390 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 WNT3AP56704 352 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 KIAA1024LP59773 190 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 PPARDQ03181 441 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 KLF1Q13351 362 aaPredicted RBP14.81□□□□□ -0.04
HDAC4-204ENST00000446876 SLC14A2Q15849 920 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 PRRT3Q5FWE3 981 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 MEI1Q5TIA1 1274 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 RAET1GQ6H3X3 334 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 ZNF662Q6ZS27 426 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 HEATR4Q86WZ0 1026 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 CHCHD4Q8N4Q1 142 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 OR4C6Q8NH72 309 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 OR1E3Q8WZA6 343 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 LYSMD1Q96S90 227 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 AGAP2Q99490 1192 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 VAT1Q99536 393 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 KCNF1Q9H3M0 494 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 WDR26Q9H7D7 661 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 FGF22Q9HCT0 170 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 MRPL40Q9NQ50 206 aaKnown RBP14.81□□□□□ -0.04
HDAC4-204ENST00000446876 KLQ9UEF7 1012 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 FAM153AQ9UHL3 310 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 WASF3Q9UPY6 502 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 SHOC2Q9UQ13 582 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 SPO11Q9Y5K1 396 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 SPEGQ15772 3267 aa14.81□□□□□ -0.04
HDAC4-204ENST00000446876 GOLGA6L9A6NEM1 432 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 AQP9O43315 295 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 NDST3O95803 873 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 SOD1P00441 154 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 TSHRP16473 764 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 TRIM23P36406 574 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 CHRNA4P43681 627 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 SRP54P61011 504 aaKnown RBP14.8□□□□□ -0.04
HDAC4-204ENST00000446876 RPS6KA1Q15418 735 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 DEFB133Q30KQ1 61 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 PROX2Q3B8N5 592 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 SEL1L2Q5TEA6 688 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 TRIM74Q86UV6 250 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 SLC25A41Q8N5S1 370 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 IPMKQ8NFU5 416 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 CCDC110Q8TBZ0 833 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 PTCD2Q8WV60 388 aaKnown RBP14.8□□□□□ -0.04
HDAC4-204ENST00000446876 ATG4AQ8WYN0 398 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 AP2M1Q96CW1 435 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 EID2BQ96D98 161 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 MRGPRX2Q96LB1 330 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 ALS2CR12Q96Q35 445 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 FCRL5Q96RD9 977 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 RIOK2Q9BVS4 552 aaKnown RBP14.8□□□□□ -0.04
HDAC4-204ENST00000446876 SLC13A1Q9BZW2 595 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 CLPBQ9H078 707 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 GBA3Q9H227 469 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 SUDS3Q9H7L9 328 aaPredicted RBP14.8□□□□□ -0.04
HDAC4-204ENST00000446876 SPASTQ9UBP0 616 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 KLK13Q9UKR3 277 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 TRHDEQ9UKU6 1024 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 DNPEPQ9ULA0 475 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 APOBEC2Q9Y235 224 aaKnown RBP14.8□□□□□ -0.04
HDAC4-204ENST00000446876 ZNF711Q9Y462 761 aa14.8□□□□□ -0.04
HDAC4-204ENST00000446876 GOLGA4Q13439 2230 aaKnown RBP14.8□□□□□ -0.04
HDAC4-204ENST00000446876 RASGRP1O95267 797 aa14.79□□□□□ -0.04
HDAC4-204ENST00000446876 MYCLP1P12525 358 aaPredicted RBP14.79□□□□□ -0.04
HDAC4-204ENST00000446876 PSMB4P28070 264 aa14.79□□□□□ -0.04
HDAC4-204ENST00000446876 GPR1P46091 355 aa14.79□□□□□ -0.04
HDAC4-204ENST00000446876 ACADVLP49748 655 aa14.79□□□□□ -0.04
HDAC4-204ENST00000446876 HK3P52790 923 aa14.79□□□□□ -0.04
HDAC4-204ENST00000446876 CLDN6P56747 220 aa14.79□□□□□ -0.04
HDAC4-204ENST00000446876 CDK3Q00526 305 aa14.79□□□□□ -0.04
HDAC4-204ENST00000446876 OLIG2Q13516 323 aa14.79□□□□□ -0.04
HDAC4-204ENST00000446876 MYLKQ15746 1914 aa14.79□□□□□ -0.04
HDAC4-204ENST00000446876 SIRPB2Q5JXA9 342 aa14.79□□□□□ -0.04
HDAC4-204ENST00000446876 ANKRD20A2Q5SQ80 823 aa14.79□□□□□ -0.04
HDAC4-204ENST00000446876 ANKRD20A1Q5TYW2 823 aa14.79□□□□□ -0.04
HDAC4-204ENST00000446876 ANKRD20A3Q5VUR7 823 aa14.79□□□□□ -0.04
HDAC4-204ENST00000446876 RAB44Q7Z6P3 723 aaPredicted RBP14.79□□□□□ -0.04
HDAC4-204ENST00000446876 OR56A4Q8NGH8 313 aa14.79□□□□□ -0.04
HDAC4-204ENST00000446876 BTN2A2Q8WVV5 523 aa14.79□□□□□ -0.04
HDAC4-204ENST00000446876 WDR24Q96S15 920 aa14.79□□□□□ -0.04
HDAC4-204ENST00000446876 SCNM1Q9BWG6 230 aa14.79□□□□□ -0.04
HDAC4-204ENST00000446876 TEX101Q9BY14 249 aa14.79□□□□□ -0.04
HDAC4-204ENST00000446876 USP29Q9HBJ7 922 aa14.79□□□□□ -0.04
HDAC4-204ENST00000446876 PHPT1Q9NRX4 125 aaPredicted RBP14.79□□□□□ -0.04
HDAC4-204ENST00000446876 NLGN3Q9NZ94 848 aa14.79□□□□□ -0.04
HDAC4-204ENST00000446876 MOSPD1Q9UJG1 213 aa14.79□□□□□ -0.04
HDAC4-204ENST00000446876 ANGPTL2Q9UKU9 493 aa14.79□□□□□ -0.04
HDAC4-204ENST00000446876 PLXNB3Q9ULL4 1909 aa14.78□□□□□ -0.04
HDAC4-204ENST00000446876 LY6G6EA0A0G2JKS1 128 aa14.78□□□□□ -0.04
HDAC4-204ENST00000446876 LOC285095A0A1B0GVY8 99 aa14.78□□□□□ -0.04
HDAC4-204ENST00000446876 AURKAO14965 403 aa14.78□□□□□ -0.04
HDAC4-204ENST00000446876 INPP4BO15327 924 aa14.78□□□□□ -0.04
HDAC4-204ENST00000446876 DKK1O94907 266 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms