RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 IQCF5A8MTL0 148 aa10.58□□□□□ -0.71
CALD1-210ENST00000443197 MRASO14807 208 aa10.58□□□□□ -0.71
CALD1-210ENST00000443197 AURKAO14965 403 aa10.58□□□□□ -0.71
CALD1-210ENST00000443197 SLC7A4O43246 635 aa10.58□□□□□ -0.71
CALD1-210ENST00000443197 SLC25A14O95258 325 aaPredicted RBP10.58□□□□□ -0.71
CALD1-210ENST00000443197 HGFP14210 728 aa10.58□□□□□ -0.71
CALD1-210ENST00000443197 EEF1B2P24534 225 aaKnown RBP10.58□□□□□ -0.71
CALD1-210ENST00000443197 VHLP40337 213 aa10.58□□□□□ -0.71
CALD1-210ENST00000443197 CYTH1Q15438 398 aa10.58□□□□□ -0.71
CALD1-210ENST00000443197 CRY1Q16526 586 aa10.58□□□□□ -0.71
CALD1-210ENST00000443197 PAQR3Q6TCH7 311 aa10.58□□□□□ -0.71
CALD1-210ENST00000443197 MIER2Q8N344 545 aa10.58□□□□□ -0.71
CALD1-210ENST00000443197 NKAPQ8N5F7 415 aaKnown RBP10.58□□□□□ -0.71
CALD1-210ENST00000443197 SIDT2Q8NBJ9 832 aaKnown RBP10.58□□□□□ -0.71
CALD1-210ENST00000443197 ARNTL2Q8WYA1 636 aa10.58□□□□□ -0.71
CALD1-210ENST00000443197 TSGA13Q96PP4 275 aa10.58□□□□□ -0.71
CALD1-210ENST00000443197 LENG8Q96PV6 779 aaPredicted RBP10.58□□□□□ -0.71
CALD1-210ENST00000443197 NPAS2Q99743 824 aa10.58□□□□□ -0.71
CALD1-210ENST00000443197 ELOVL6Q9H5J4 265 aa10.58□□□□□ -0.71
CALD1-210ENST00000443197 POLR3BQ9NW08 1133 aaPredicted RBP10.58□□□□□ -0.71
CALD1-210ENST00000443197 SNX13Q9Y5W8 968 aa10.58□□□□□ -0.71
CALD1-210ENST00000443197 K7ERQ8 282 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 PRMT5O14744 637 aaPredicted RBP10.58□□□□□ -0.72
CALD1-210ENST00000443197 TP73O15350 636 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 RFPL2O75678 378 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 STC2O76061 302 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 PRKAA2P54646 552 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 EMC10Q5UCC4 262 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 TMEM135Q86UB9 458 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 TRAPPC5Q8IUR0 188 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 UMODL1-AS1Q8N2C9 162 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 OR56A4Q8NGH8 313 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 UCMAQ8WVF2 138 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 PGAP3Q96FM1 320 aaPredicted RBP10.58□□□□□ -0.72
CALD1-210ENST00000443197 C1orf74Q96LT6 269 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 OXCT2Q9BYC2 517 aaPredicted RBP10.58□□□□□ -0.72
CALD1-210ENST00000443197 TAS2R1Q9NYW7 299 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 PNMA8BQ9ULN7 279 aaPredicted RBP10.58□□□□□ -0.72
CALD1-210ENST00000443197 HHLA1C9JL84 531 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 ARSDP51689 593 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 MRPS22P82650 360 aaKnown RBP10.58□□□□□ -0.72
CALD1-210ENST00000443197 ZYG11AQ6WRX3 759 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 KIAA0408Q6ZU52 694 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 TMEM159Q96B96 161 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 KIFC1Q9BW19 673 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 ZFP14Q9HCL3 533 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 MRPL40Q9NQ50 206 aaKnown RBP10.58□□□□□ -0.72
CALD1-210ENST00000443197 PHF24Q9UPV7 400 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 ILVBLA1L0T0 632 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 TMEM114B3SHH9 223 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 PRAMEF11O60813 436 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 EFCAB14O75071 495 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 TGDSO95455 350 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 OR56A5P0C7T3 313 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 ZCCHC18P0CG32 403 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 SKIV2L2P42285 1042 aaKnown RBP10.58□□□□□ -0.72
CALD1-210ENST00000443197 IDH3AP50213 366 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 DSC1Q08554 894 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 KLF10Q13118 480 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 CPSF6Q16630 551 aaKnown RBP eCLIP10.58□□□□□ -0.72
CALD1-210ENST00000443197 TRMT5Q32P41 509 aaKnown RBP10.58□□□□□ -0.72
CALD1-210ENST00000443197 SLC9B1Q4ZJI4 515 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 ATP6AP1LQ52LC2 224 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 RALGPS1Q5JS13 557 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 ACBD5Q5T8D3 534 aaPredicted RBP10.58□□□□□ -0.72
CALD1-210ENST00000443197 LYSMD3Q7Z3D4 306 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 SYTL1Q8IYJ3 562 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 STK40Q8N2I9 435 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 SMIM14Q96QK8 99 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 COPS8Q99627 209 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 ECSITQ9BQ95 431 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 C17orf80Q9BSJ5 609 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 RNPEPL1Q9HAU8 725 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 GID8Q9NWU2 228 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 APPL1Q9UKG1 709 aa10.58□□□□□ -0.72
CALD1-210ENST00000443197 DLX3O60479 287 aa10.57□□□□□ -0.72
CALD1-210ENST00000443197 MTX2O75431 263 aa10.57□□□□□ -0.72
CALD1-210ENST00000443197 MYO1DO94832 1006 aa10.57□□□□□ -0.72
CALD1-210ENST00000443197 SEC24AO95486 1093 aa10.57□□□□□ -0.72
CALD1-210ENST00000443197 PRSS56P0CW18 603 aa10.57□□□□□ -0.72
CALD1-210ENST00000443197 IL10P22301 178 aa10.57□□□□□ -0.72
CALD1-210ENST00000443197 PIK3R1P27986 724 aa10.57□□□□□ -0.72
CALD1-210ENST00000443197 MSLNQ13421 630 aaPredicted RBP10.57□□□□□ -0.72
CALD1-210ENST00000443197 PCLAFQ15004 111 aa10.57□□□□□ -0.72
CALD1-210ENST00000443197 LSM12Q3MHD2 195 aaKnown RBP10.57□□□□□ -0.72
CALD1-210ENST00000443197 SETMARQ53H47 684 aaPredicted RBP10.57□□□□□ -0.72
CALD1-210ENST00000443197 GET4Q7L5D6 327 aaPredicted RBP10.57□□□□□ -0.72
CALD1-210ENST00000443197 ARHGAP12Q8IWW6 846 aa10.57□□□□□ -0.72
CALD1-210ENST00000443197 BBS7Q8IWZ6 715 aa10.57□□□□□ -0.72
CALD1-210ENST00000443197 ELMO1Q92556 727 aa10.57□□□□□ -0.72
CALD1-210ENST00000443197 FEM1CQ96JP0 617 aa10.57□□□□□ -0.72
CALD1-210ENST00000443197 MYOCQ99972 504 aa10.57□□□□□ -0.72
CALD1-210ENST00000443197 FAM126AQ9BYI3 521 aaPredicted RBP10.57□□□□□ -0.72
CALD1-210ENST00000443197 TRIM15Q9C019 465 aa10.57□□□□□ -0.72
CALD1-210ENST00000443197 WDR41Q9HAD4 459 aa10.57□□□□□ -0.72
CALD1-210ENST00000443197 OPTCQ9UBM4 332 aa10.57□□□□□ -0.72
CALD1-210ENST00000443197 DPP7Q9UHL4 492 aa10.57□□□□□ -0.72
CALD1-210ENST00000443197 INSL6Q9Y581 213 aa10.57□□□□□ -0.72
CALD1-210ENST00000443197 WNT6Q9Y6F9 365 aa10.57□□□□□ -0.72
CALD1-210ENST00000443197 GLYATL1P3A0A0U1RQE8 302 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms