RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 POLR3FQ9H1D9 316 aaPredicted RBP13.73□□□□□ -0.21
LINC02048-201ENST00000440556 RHOJQ9H4E5 214 aa13.73□□□□□ -0.21
LINC02048-201ENST00000440556 CAB39LQ9H9S4 337 aa13.73□□□□□ -0.21
LINC02048-201ENST00000440556 GGA3Q9NZ52 723 aa13.73□□□□□ -0.21
LINC02048-201ENST00000440556 SLC39A10Q9ULF5 831 aa13.73□□□□□ -0.21
LINC02048-201ENST00000440556 PCDHA10Q9Y5I2 948 aa13.73□□□□□ -0.21
LINC02048-201ENST00000440556 PMF1-BGLAPU3KQ54 211 aa13.73□□□□□ -0.21
LINC02048-201ENST00000440556 KLRG2A4D1S0 409 aaPredicted RBP13.72□□□□□ -0.21
LINC02048-201ENST00000440556 K7ERI5 159 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 POLRMTO00411 1230 aaKnown RBP13.72□□□□□ -0.21
LINC02048-201ENST00000440556 HAT1O14929 419 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 RIMBP2O15034 1052 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 POLR1CO15160 346 aaPredicted RBP13.72□□□□□ -0.21
LINC02048-201ENST00000440556 MYCLP1P12525 358 aaPredicted RBP13.72□□□□□ -0.21
LINC02048-201ENST00000440556 GPX3P22352 226 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 DNAJB2P25686 324 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 GMPRP36959 345 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 ASPAP45381 313 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 RAP1GAPP47736 663 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 GLUD2P49448 558 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 PPP2R2BQ00005 443 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 PRKCDQ05655 676 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 POU6F1Q14863 301 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 DPYSL2Q16555 572 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 DPY19L1Q2PZI1 675 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 BRMS1LQ5PSV4 323 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 STEAP3Q658P3 488 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 NEK5Q6P3R8 708 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 SCYL2Q6P3W7 929 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 PIGZQ86VD9 579 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 KCNMB4Q86W47 210 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 ZC3HC1Q86WB0 502 aaKnown RBP13.72□□□□□ -0.21
LINC02048-201ENST00000440556 GALNT12Q8IXK2 581 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 SP8Q8IXZ3 490 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 NDNFQ8TB73 568 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 FIG4Q92562 907 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 MARVELD3Q96A59 401 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 FCRL3Q96P31 734 aaPredicted RBP13.72□□□□□ -0.21
LINC02048-201ENST00000440556 KCTD14Q9BQ13 255 aaPredicted RBP13.72□□□□□ -0.21
LINC02048-201ENST00000440556 RETREG1Q9H6L5 497 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 TMEM134Q9H6X4 195 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 DDX28Q9NUL7 540 aaKnown RBP13.72□□□□□ -0.21
LINC02048-201ENST00000440556 FAM118AQ9NWS6 357 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 CMTM6Q9NX76 183 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 USE1Q9NZ43 259 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 MAP10Q9P2G4 905 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 PCDHA9Q9Y5H5 950 aa13.72□□□□□ -0.21
LINC02048-201ENST00000440556 COL2A1P02458 1487 aaPredicted RBP13.72□□□□□ -0.21
LINC02048-201ENST00000440556 A0A087X1B8 175 aa13.71□□□□□ -0.21
LINC02048-201ENST00000440556 PABPN1LA6NDY0 278 aaKnown RBP13.71□□□□□ -0.21
LINC02048-201ENST00000440556 AGAP5A6NIR3 686 aa13.71□□□□□ -0.21
LINC02048-201ENST00000440556 ERI2A8K979 691 aaKnown RBP13.71□□□□□ -0.21
LINC02048-201ENST00000440556 SHOXO15266 292 aa13.71□□□□□ -0.21
LINC02048-201ENST00000440556 XYLBO75191 536 aa13.71□□□□□ -0.21
LINC02048-201ENST00000440556 INMTO95050 263 aa13.71□□□□□ -0.21
LINC02048-201ENST00000440556 MMP10P09238 476 aa13.71□□□□□ -0.21
LINC02048-201ENST00000440556 RYKP34925 604 aa13.71□□□□□ -0.21
LINC02048-201ENST00000440556 ARL1P40616 181 aaPredicted RBP13.71□□□□□ -0.21
LINC02048-201ENST00000440556 SNX16P57768 344 aa13.71□□□□□ -0.21
LINC02048-201ENST00000440556 GALK2Q01415 458 aa13.71□□□□□ -0.21
LINC02048-201ENST00000440556 IFRD2Q12894 506 aaPredicted RBP13.71□□□□□ -0.21
LINC02048-201ENST00000440556 USP10Q14694 798 aaKnown RBP13.71□□□□□ -0.21
LINC02048-201ENST00000440556 PLEKHG6Q3KR16 790 aa13.71□□□□□ -0.21
LINC02048-201ENST00000440556 SYT6Q5T7P8 510 aaPredicted RBP13.71□□□□□ -0.21
LINC02048-201ENST00000440556 CCBE1Q6UXH8 406 aaPredicted RBP13.71□□□□□ -0.21
LINC02048-201ENST00000440556 ZBTB33Q86T24 672 aa13.71□□□□□ -0.21
LINC02048-201ENST00000440556 CLEC4FQ8N1N0 589 aa13.71□□□□□ -0.21
LINC02048-201ENST00000440556 PJA1Q8NG27 643 aa13.71□□□□□ -0.21
LINC02048-201ENST00000440556 FAR1Q8WVX9 515 aa13.71□□□□□ -0.21
LINC02048-201ENST00000440556 JPH3Q8WXH2 748 aaPredicted RBP13.71□□□□□ -0.21
LINC02048-201ENST00000440556 LRRC58Q96CX6 371 aa13.71□□□□□ -0.21
LINC02048-201ENST00000440556 TMEM246Q9BRR3 403 aa13.71□□□□□ -0.21
LINC02048-201ENST00000440556 BTBD2Q9BX70 525 aa13.71□□□□□ -0.21
LINC02048-201ENST00000440556 IDI2Q9BXS1 227 aa13.71□□□□□ -0.21
LINC02048-201ENST00000440556 GON7Q9BXV9 100 aa13.71□□□□□ -0.21
LINC02048-201ENST00000440556 HAPLN2Q9GZV7 340 aa13.71□□□□□ -0.21
LINC02048-201ENST00000440556 MKRN2Q9H000 416 aaKnown RBP13.71□□□□□ -0.21
LINC02048-201ENST00000440556 FAM49AQ9H0Q0 323 aaPredicted RBP13.71□□□□□ -0.21
LINC02048-201ENST00000440556 EGFL7Q9UHF1 273 aa13.71□□□□□ -0.21
LINC02048-201ENST00000440556 SPEF1Q9Y4P9 236 aa13.71□□□□□ -0.21
LINC02048-201ENST00000440556 CNTNAP1P78357 1384 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 ZFC3H1O60293 1989 aaKnown RBP13.71□□□□□ -0.22
LINC02048-201ENST00000440556 ZCWPW2A0A1B0GU75 182 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 PNMA8CA0A1B0GUJ8 204 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 CLDN24A6NM45 220 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 SLC1A7O00341 560 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 ZW10O43264 779 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 MICAL2O94851 1124 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 ZBTB7AO95365 584 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 MATN4O95460 622 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 MSL3P1P0C860 447 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 HDCP19113 662 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 SLC6A2P23975 617 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 HTR1EP28566 365 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 SDC4P31431 198 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 ST13P50502 369 aaKnown RBP13.71□□□□□ -0.22
LINC02048-201ENST00000440556 CLCNKBP51801 687 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 GBE1Q04446 702 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 RAD51Q06609 339 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 GEN1Q17RS7 908 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms