RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 NPHS1O60500 1241 aa8.58□□□□□ -1.04
HPS4-206ENST00000439453 TSPAN1O60635 241 aa8.58□□□□□ -1.04
HPS4-206ENST00000439453 CLPXO76031 633 aa8.58□□□□□ -1.04
HPS4-206ENST00000439453 GJB5O95377 273 aa8.58□□□□□ -1.04
HPS4-206ENST00000439453 HADHAP40939 763 aa8.58□□□□□ -1.04
HPS4-206ENST00000439453 GLUD2P49448 558 aa8.58□□□□□ -1.04
HPS4-206ENST00000439453 KPNA1P52294 538 aaPredicted RBP8.58□□□□□ -1.04
HPS4-206ENST00000439453 EEF1DP3Q658K8 133 aa8.58□□□□□ -1.04
HPS4-206ENST00000439453 C8orf82Q6P1X6 216 aaPredicted RBP8.58□□□□□ -1.04
HPS4-206ENST00000439453 ZBTB8OSQ8IWT0 167 aa8.58□□□□□ -1.04
HPS4-206ENST00000439453 SNX31Q8N9S9 440 aa8.58□□□□□ -1.04
HPS4-206ENST00000439453 PCYOX1LQ8NBM8 494 aa8.58□□□□□ -1.04
HPS4-206ENST00000439453 RNF149Q8NC42 400 aa8.58□□□□□ -1.04
HPS4-206ENST00000439453 PDPRQ8NCN5 879 aa8.58□□□□□ -1.04
HPS4-206ENST00000439453 OR13F1Q8NGS4 319 aa8.58□□□□□ -1.04
HPS4-206ENST00000439453 PHOSPHO2Q8TCD6 241 aa8.58□□□□□ -1.04
HPS4-206ENST00000439453 ZUFSPQ96AP4 578 aa8.58□□□□□ -1.04
HPS4-206ENST00000439453 ERLEC1Q96DZ1 483 aa8.58□□□□□ -1.04
HPS4-206ENST00000439453 CCDC138Q96M89 665 aa8.58□□□□□ -1.04
HPS4-206ENST00000439453 SLC39A3Q9BRY0 314 aa8.58□□□□□ -1.04
HPS4-206ENST00000439453 SLC25A23Q9BV35 468 aa8.58□□□□□ -1.04
HPS4-206ENST00000439453 B3GNT5Q9BYG0 378 aa8.58□□□□□ -1.04
HPS4-206ENST00000439453 MRGBPQ9NV56 204 aa8.58□□□□□ -1.04
HPS4-206ENST00000439453 XPR1Q9UBH6 696 aa8.58□□□□□ -1.04
HPS4-206ENST00000439453 MAGED2Q9UNF1 606 aaPredicted RBP8.58□□□□□ -1.04
HPS4-206ENST00000439453 DHRS12A0PJE2 317 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 B4GALT5O43286 388 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 TPST1O60507 370 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 IL18RAPO95256 599 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 IL10P22301 178 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 FASP25445 335 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 CAPGP40121 348 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 ARL4AP40617 200 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 YAP1P46937 504 aaKnown RBP8.57□□□□□ -1.04
HPS4-206ENST00000439453 SLC12A1Q13621 1099 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 TMEM132AQ24JP5 1023 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 TSTD2Q5T7W7 516 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 CNSTQ6PJW8 725 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 HACD2Q6Y1H2 254 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 CHST15Q7LFX5 561 aaPredicted RBP8.57□□□□□ -1.04
HPS4-206ENST00000439453 PID1Q7Z2X4 250 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 CENPLQ8N0S6 344 aaPredicted RBP8.57□□□□□ -1.04
HPS4-206ENST00000439453 DHRSXQ8N5I4 330 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 DNAAF3Q8N9W5 541 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 FEM1CQ96JP0 617 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 LRRC4Q9HBW1 653 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 PTPRHQ9HD43 1115 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 DAPK2Q9UIK4 370 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 GINS2Q9Y248 185 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 GIT1Q9Y2X7 761 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 EPOPA6NHQ4 379 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 SPTLC1O15269 473 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 RASAL1O95294 804 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 SLC35E2BP0CK96 405 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 GNL1P36915 607 aaPredicted RBP8.57□□□□□ -1.04
HPS4-206ENST00000439453 POLR2IP36954 125 aaKnown RBP8.57□□□□□ -1.04
HPS4-206ENST00000439453 PTPN9P43378 593 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 GATMP50440 423 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 HLCSP50747 726 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 MLLT10P55197 1068 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 INPP5AQ14642 412 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 OXA1LQ15070 435 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 EML3Q32P44 896 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 ATF7IP2Q5U623 682 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 SPRED1Q7Z699 444 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 EXOC8Q8IYI6 725 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 STARD8Q92502 1023 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 CENPNQ96H22 339 aaPredicted RBP8.57□□□□□ -1.04
HPS4-206ENST00000439453 OMDQ99983 421 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 YTHDF1Q9BYJ9 559 aaKnown RBP8.57□□□□□ -1.04
HPS4-206ENST00000439453 TRIM15Q9C019 465 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 FZD8Q9H461 694 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 PKD2L2Q9NZM6 624 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 KIAA1257Q9ULG3 409 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 OAZ3Q9UMX2 235 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 TMEM98Q9Y2Y6 226 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 CPQQ9Y646 472 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 VWA8A3KMH1 1905 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.57□□□□□ -1.04
HPS4-206ENST00000439453 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.57□□□□□ -1.04
HPS4-206ENST00000439453 MEIS3P2A8K0S8 358 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 LACTBL1A8MY62 500 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 KDM1AO60341 852 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 GPC4O75487 556 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 GABBR2O75899 941 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 CPNE6O95741 557 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 C7P10643 843 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 HNRNPLP14866 589 aaKnown RBP eCLIP8.57□□□□□ -1.04
HPS4-206ENST00000439453 DNAJB2P25686 324 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 ATICP31939 592 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 MXD4Q14582 209 aaPredicted RBP8.57□□□□□ -1.04
HPS4-206ENST00000439453 PPP1R3AQ16821 1122 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 FAM187BQ17R55 369 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 CERCAMQ5T4B2 595 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 DEPDC1Q5TB30 811 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 JADE1Q6IE81 842 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 GPR153Q6NV75 609 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 ZC3HC1Q86WB0 502 aaKnown RBP8.57□□□□□ -1.04
HPS4-206ENST00000439453 SPPL2CQ8IUH8 684 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 PSTKQ8IV42 348 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms