RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 OR56A4Q8NGH8 313 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 RDH11Q8TC12 318 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 TRPC4APQ8TEL6 797 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 ARNTL2Q8WYA1 636 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 STK39Q9UEW8 545 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 ATP6AP2A0A1C7CYW4 349 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 ATP6AP2O75787 350 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 MZF1P28698 734 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 HALP42357 657 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 TBL3Q12788 808 aaKnown RBP11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 DPYSQ14117 519 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 ZNF460Q14592 562 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 WASHC2DQ5SRD0 308 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 FOXB2Q5VYV0 432 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 KIAA0930Q6ICG6 404 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 PAQR9Q6ZVX9 377 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 ZNF786Q8N393 782 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 FBXO27Q8NI29 283 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 BRSK1Q8TDC3 778 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 ASB3Q9Y575 518 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 ORC6Q9Y5N6 252 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 H3BMM5 538 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 BAIAP3O94812 1187 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 FGFR3P22607 806 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 PTK2BQ14289 1009 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 PPP2R2DQ66LE6 453 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 SLC39A5Q6ZMH5 540 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 KBTBD2Q8IY47 623 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 NPWQ8N729 165 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 FAM126AQ9BYI3 521 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 ELOVL6Q9H5J4 265 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 TBC1D14Q9P2M4 693 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 FOCADQ5VW36 1801 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 E7ESA3 106 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 PRMT5O14744 637 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 GSC2O15499 205 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 SLC7A4O43246 635 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 SNAP91O60641 907 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 GJB5O95377 273 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 FESP07332 822 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 COL6A2P12110 1019 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 PTPN2P17706 415 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 IL4RP24394 825 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 NEK3P51956 506 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 FASTKQ14296 549 aaKnown RBP11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 DET1Q7L5Y6 550 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 TMCO2Q7Z6W1 182 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 PRPF18Q99633 342 aaKnown RBP11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 NMUR2Q9GZQ4 415 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 ARL15Q9NXU5 204 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 FNIP2Q9P278 1114 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 EIF3LQ9Y262 564 aaKnown RBP11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 LRCH1Q9Y2L9 728 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 FGF18O76093 207 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 CLPTM1O96005 669 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 PKMP14618 531 aaKnown RBP11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 DGKAP23743 735 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 PRKCHP24723 683 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 SLC1A2P43004 574 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 ZNF33AQ06730 810 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 INPP5AQ14642 412 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 SETMARQ53H47 684 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 PM20D1Q6GTS8 502 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 CYP2R1Q6VVX0 501 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 MCOLN3Q8TDD5 553 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 MARK4Q96L34 752 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 SEMA6AQ9H2E6 1030 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 ZMYM5Q9UJ78 669 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 RWDD3Q9Y3V2 267 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 INSL5Q9Y5Q6 135 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 TCRBV5S1A1TA0A578 114 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 ILVBLA1L0T0 632 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 OR51F1A6NGY5 319 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 GOT2P00505 430 aaKnown RBP11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 USP46P62068 366 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 MLLT1Q03111 559 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 RAB30Q15771 203 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 CRY1Q16526 586 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 NRF1Q16656 503 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 FUT11Q495W5 492 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 CACHD1Q5VU97 1274 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 CNSTQ6PJW8 725 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 TRMT11Q7Z4G4 463 aaKnown RBP11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 MILR1Q7Z6M3 343 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 DSG4Q86SJ6 1040 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 FNDC5Q8NAU1 212 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 ASB2Q96Q27 587 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 COPS8Q99627 209 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 GRIP2Q9C0E4 1043 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 OSGEPL1Q9H4B0 414 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 ZNF395Q9H8N7 513 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 WDR6Q9NNW5 1121 aaKnown RBP11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 COMMD8Q9NX08 183 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 PHF24Q9UPV7 400 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 TMEM114B3SHH9 223 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 IL1BP01584 269 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 GSTT1P30711 240 aa11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 UBAP2LQ14157 1087 aaKnown RBP11.56□□□□□ -0.56
TRAPPC9-202ENST00000438773 FSTL5Q8N475 847 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms