RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 ACVRL1P37023 503 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 PPP3CCP48454 512 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 PLK1P53350 603 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 RPS24P62847 133 aaKnown RBP13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 PRKAA1Q13131 559 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 GK3PQ14409 553 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 PDK3Q15120 406 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 PARP15Q460N3 678 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 C7orf61Q8IZ16 206 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 PGBD5Q8N414 524 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 PRICKLE1Q96MT3 831 aaPredicted RBP13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 CATSPER2Q96P56 530 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 SLC22A12Q96S37 553 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 CYP2S1Q96SQ9 504 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 KLF16Q9BXK1 252 aaPredicted RBP13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 KLHL4Q9C0H6 718 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 GPAMQ9HCL2 828 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 STK39Q9UEW8 545 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 KCTD3Q9Y597 815 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 COMMD3-BMI1R4GMX3 469 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 FKBP6O75344 327 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 MBL2P11226 248 aaPredicted RBP13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 NUDT2P50583 147 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 ARSDP51689 593 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 SERINC3Q13530 473 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 C5orf22Q49AR2 442 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 FAM219BQ5XKK7 198 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 ITIH5Q86UX2 942 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 SNX32Q86XE0 403 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 HERC6Q8IVU3 1022 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 ACTRT2Q8TDY3 377 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 HIC2Q96JB3 615 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 IL21Q9HBE4 155 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 DDX18Q9NVP1 670 aaKnown RBP13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 GALNT8Q9NY28 637 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 MAFFQ9ULX9 164 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 ARHGAP26Q9UNA1 814 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 CHD5Q8TDI0 1954 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 SCAMP3O14828 347 aaKnown RBP13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 F11P03951 625 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 SYN1P17600 705 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 KCNA5P22460 613 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 PIK3R1P27986 724 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 SGSHP51688 502 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 POU4F1Q01851 419 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 GRAMD1BQ3KR37 738 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 SIRPB2Q5JXA9 342 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 SH2D4BQ5SQS7 431 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 TRIM67Q6ZTA4 783 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 FATE1Q969F0 183 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 HDAC10Q969S8 669 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 SUDS3Q9H7L9 328 aaPredicted RBP13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 IGSF5Q9NSI5 407 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 GTSE1Q9NYZ3 720 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 ATXN10Q9UBB4 475 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 AGO1Q9UL18 857 aaKnown RBP13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 CDYLQ9Y232 598 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 SLC4A7Q9Y6M7 1214 aa13.9□□□□□ -0.18
PTCHD3-201ENST00000438700 LAMA3Q16787 3333 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 CCNT2O60583 730 aaKnown RBP13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 PIRTP0C851 137 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 CCDC166P0CW27 439 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 MSX2P35548 267 aaPredicted RBP13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 YBEYP58557 167 aaPredicted RBP13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 PRAMEP78395 509 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 FOLH1Q04609 750 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 PTPRCAPQ14761 206 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 METTL21CQ5VZV1 264 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 TXNDC8Q6A555 127 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 PSRC1Q6PGN9 363 aaPredicted RBP13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 UGT2A3Q6UWM9 527 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 LCA5Q86VQ0 697 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 ZFRQ96KR1 1074 aaKnown RBP13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 RAD9AQ99638 391 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 TCF25Q9BQ70 676 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 MRPL57Q9BQC6 102 aaKnown RBP13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 ARNT2Q9HBZ2 717 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 ATP13A1Q9HD20 1204 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 ZDHHC7Q9NXF8 308 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 POMPQ9Y244 141 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 ACTL7AQ9Y615 435 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 A0A087X1B8 175 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 A0A0D9SEW6 157 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 TLL1O43897 1013 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 TSPAN3O60637 253 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 SMIM18P0DKX4 95 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 ARSAP15289 507 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 CTNNB1P35222 781 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 ERVFC1P60507 584 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 IL10RBQ08334 325 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 TLR1Q15399 786 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 CILP2Q8IUL8 1156 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 ARL14EPQ8N8R7 260 aaPredicted RBP13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 OR52K2Q8NGK3 314 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 SH3RF2Q8TEC5 729 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 PHF21BQ96EK2 531 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 SEMA3CQ99985 751 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 MCOLN1Q9GZU1 580 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 VPS45Q9NRW7 570 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 UBAP1Q9NZ09 502 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms