RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 MRPL43Q8N983 215 aaKnown RBP25.67■■□□□ 1.7
CPNE1-216ENST00000437340 SGF29Q96ES7 293 aa25.67■■□□□ 1.7
CPNE1-216ENST00000437340 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP25.67■■□□□ 1.7
CPNE1-216ENST00000437340 A8MT66 165 aa25.67■■□□□ 1.7
CPNE1-216ENST00000437340 STX7O15400 261 aaKnown RBP25.67■■□□□ 1.7
CPNE1-216ENST00000437340 MT-CO1P00395 513 aa25.67■■□□□ 1.7
CPNE1-216ENST00000437340 CCND1P24385 295 aa25.67■■□□□ 1.7
CPNE1-216ENST00000437340 ABL2P42684 1182 aa25.67■■□□□ 1.7
CPNE1-216ENST00000437340 RPL26P61254 145 aaKnown RBP25.67■■□□□ 1.7
CPNE1-216ENST00000437340 SLC9B1Q4ZJI4 515 aa25.67■■□□□ 1.7
CPNE1-216ENST00000437340 PPM1LQ5SGD2 360 aa25.67■■□□□ 1.7
CPNE1-216ENST00000437340 ISCA2Q86U28 154 aa25.67■■□□□ 1.7
CPNE1-216ENST00000437340 CCNYL1Q8N7R7 359 aa25.67■■□□□ 1.7
CPNE1-216ENST00000437340 SPPL3Q8TCT6 385 aa25.67■■□□□ 1.7
CPNE1-216ENST00000437340 TCF7L2Q9NQB0 619 aa25.67■■□□□ 1.7
CPNE1-216ENST00000437340 ZDHHC2Q9UIJ5 367 aa25.67■■□□□ 1.7
CPNE1-216ENST00000437340 CHD7Q9P2D1 2997 aa25.66■■□□□ 1.7
CPNE1-216ENST00000437340 BPTFQ12830 3046 aa25.66■■□□□ 1.7
CPNE1-216ENST00000437340 NDUFS3O75489 264 aa25.66■■□□□ 1.7
CPNE1-216ENST00000437340 SLC4A1P02730 911 aa25.66■■□□□ 1.7
CPNE1-216ENST00000437340 ZNF37AP17032 561 aaPredicted RBP25.66■■□□□ 1.7
CPNE1-216ENST00000437340 DDX6P26196 483 aaKnown RBP eCLIP25.66■■□□□ 1.79e-13■■■■□ 25.3
CPNE1-216ENST00000437340 PLK1P53350 603 aa25.66■■□□□ 1.7
CPNE1-216ENST00000437340 EPHA5P54756 1037 aa25.66■■□□□ 1.7
CPNE1-216ENST00000437340 GALNT1Q10472 559 aaPredicted RBP25.66■■□□□ 1.7
CPNE1-216ENST00000437340 ARMC12Q5T9G4 340 aa25.66■■□□□ 1.7
CPNE1-216ENST00000437340 PIM3Q86V86 326 aa25.66■■□□□ 1.7
CPNE1-216ENST00000437340 MAPK15Q8TD08 544 aa25.66■■□□□ 1.7
CPNE1-216ENST00000437340 POF1BQ8WVV4 589 aa25.66■■□□□ 1.7
CPNE1-216ENST00000437340 MCUR1Q96AQ8 359 aa25.66■■□□□ 1.7
CPNE1-216ENST00000437340 C19orf43Q9BQ61 176 aa25.66■■□□□ 1.7
CPNE1-216ENST00000437340 SYTL2Q9HCH5 934 aa25.66■■□□□ 1.7
CPNE1-216ENST00000437340 MAGEE1Q9HCI5 957 aa25.66■■□□□ 1.7
CPNE1-216ENST00000437340 ABCB8Q9NUT2 735 aa25.66■■□□□ 1.7
CPNE1-216ENST00000437340 POLR3BQ9NW08 1133 aaPredicted RBP25.66■■□□□ 1.7
CPNE1-216ENST00000437340 PCDHB9Q9Y5E1 797 aa25.66■■□□□ 1.7
CPNE1-216ENST00000437340 RANBP2P49792 3224 aaKnown RBP25.66■■□□□ 1.7
CPNE1-216ENST00000437340 C5orf67F2Z3F1 127 aa25.65■■□□□ 1.7
CPNE1-216ENST00000437340 CCL16O15467 120 aa25.65■■□□□ 1.7
CPNE1-216ENST00000437340 CYBBP04839 570 aa25.65■■□□□ 1.7
CPNE1-216ENST00000437340 CD1DP15813 335 aa25.65■■□□□ 1.7
CPNE1-216ENST00000437340 TTPAP49638 278 aa25.65■■□□□ 1.7
CPNE1-216ENST00000437340 EPHB1P54762 984 aa25.65■■□□□ 1.7
CPNE1-216ENST00000437340 NFKB2Q00653 900 aa25.65■■□□□ 1.7
CPNE1-216ENST00000437340 LMAN2Q12907 356 aa25.65■■□□□ 1.7
CPNE1-216ENST00000437340 DNAL1Q4LDG9 190 aa25.65■■□□□ 1.7
CPNE1-216ENST00000437340 AARS2Q5JTZ9 985 aaKnown RBP25.65■■□□□ 1.7
CPNE1-216ENST00000437340 ATXN7L2Q5T6C5 722 aaPredicted RBP25.65■■□□□ 1.7
CPNE1-216ENST00000437340 KIRREL3Q8IZU9 778 aa25.65■■□□□ 1.7
CPNE1-216ENST00000437340 EFHBQ8N7U6 833 aa25.65■■□□□ 1.7
CPNE1-216ENST00000437340 TTC16Q8NEE8 873 aa25.65■■□□□ 1.7
CPNE1-216ENST00000437340 SLC22A17Q8WUG5 538 aa25.65■■□□□ 1.7
CPNE1-216ENST00000437340 BHMTQ93088 406 aa25.65■■□□□ 1.7
CPNE1-216ENST00000437340 MOCOSQ96EN8 888 aa25.65■■□□□ 1.7
CPNE1-216ENST00000437340 CCDC68Q9H2F9 335 aa25.65■■□□□ 1.7
CPNE1-216ENST00000437340 EML4Q9HC35 981 aaKnown RBP25.65■■□□□ 1.7
CPNE1-216ENST00000437340 CHD9Q3L8U1 2897 aa25.65■■□□□ 1.7
CPNE1-216ENST00000437340 GRID2O43424 1007 aa25.64■■□□□ 1.7
CPNE1-216ENST00000437340 PGLSO95336 258 aa25.64■■□□□ 1.7
CPNE1-216ENST00000437340 GJA1P17302 382 aa25.64■■□□□ 1.7
CPNE1-216ENST00000437340 CD9P21926 228 aa25.64■■□□□ 1.7
CPNE1-216ENST00000437340 PRDX6P30041 224 aa25.64■■□□□ 1.7
CPNE1-216ENST00000437340 CCR10P46092 362 aa25.64■■□□□ 1.7
CPNE1-216ENST00000437340 KDSRQ06136 332 aa25.64■■□□□ 1.7
CPNE1-216ENST00000437340 PDAP1Q13442 181 aaKnown RBP25.64■■□□□ 1.7
CPNE1-216ENST00000437340 PLEKHG6Q3KR16 790 aa25.64■■□□□ 1.7
CPNE1-216ENST00000437340 PLPP4Q5VZY2 271 aa25.64■■□□□ 1.7
CPNE1-216ENST00000437340 RHEBL1Q8TAI7 183 aa25.64■■□□□ 1.7
CPNE1-216ENST00000437340 MYO19Q96H55 970 aa25.64■■□□□ 1.7
CPNE1-216ENST00000437340 ALG9Q9H6U8 611 aa25.64■■□□□ 1.7
CPNE1-216ENST00000437340 TAS2R13Q9NYV9 303 aa25.64■■□□□ 1.7
CPNE1-216ENST00000437340 MTCL1Q9Y4B5 1905 aaKnown RBP25.64■■□□□ 1.7
CPNE1-216ENST00000437340 ATG2AQ2TAZ0 1938 aa25.64■■□□□ 1.69
CPNE1-216ENST00000437340 NEMP2A6NFY4 417 aa25.64■■□□□ 1.69
CPNE1-216ENST00000437340 HIDE1A8MVS5 230 aa25.64■■□□□ 1.69
CPNE1-216ENST00000437340 NRG2O14511 850 aaPredicted RBP25.64■■□□□ 1.69
CPNE1-216ENST00000437340 MAGEC1O60732 1142 aa25.64■■□□□ 1.69
CPNE1-216ENST00000437340 NCF2P19878 526 aaPredicted RBP25.64■■□□□ 1.69
CPNE1-216ENST00000437340 MC4RP32245 332 aa25.64■■□□□ 1.69
CPNE1-216ENST00000437340 CLCN4P51793 760 aa25.64■■□□□ 1.69
CPNE1-216ENST00000437340 TPGS1Q6ZTW0 290 aa25.64■■□□□ 1.69
CPNE1-216ENST00000437340 KDM1BQ8NB78 822 aa25.64■■□□□ 1.69
CPNE1-216ENST00000437340 RBM15BQ8NDT2 890 aaKnown RBP25.64■■□□□ 1.69
CPNE1-216ENST00000437340 AGR3Q8TD06 166 aa25.64■■□□□ 1.69
CPNE1-216ENST00000437340 SMIM14Q96QK8 99 aa25.64■■□□□ 1.69
CPNE1-216ENST00000437340 TRMOQ9BU70 441 aa25.64■■□□□ 1.69
CPNE1-216ENST00000437340 CCDC28BQ9BUN5 200 aa25.64■■□□□ 1.69
CPNE1-216ENST00000437340 FKBPLQ9UIM3 349 aa25.64■■□□□ 1.69
CPNE1-216ENST00000437340 YBX2Q9Y2T7 364 aaKnown RBP25.64■■□□□ 1.69
CPNE1-216ENST00000437340 UBA6A0AVT1 1052 aaPredicted RBP25.63■■□□□ 1.69
CPNE1-216ENST00000437340 SOBPA7XYQ1 873 aa25.63■■□□□ 1.69
CPNE1-216ENST00000437340 K7ERQ8 282 aa25.63■■□□□ 1.69
CPNE1-216ENST00000437340 SOCS5O75159 536 aa25.63■■□□□ 1.69
CPNE1-216ENST00000437340 RHOBTB1O94844 696 aa25.63■■□□□ 1.69
CPNE1-216ENST00000437340 PRSS56P0CW18 603 aa25.63■■□□□ 1.69
CPNE1-216ENST00000437340 HMGCLP35914 325 aa25.63■■□□□ 1.69
CPNE1-216ENST00000437340 ACAD11Q709F0 780 aa25.63■■□□□ 1.69
CPNE1-216ENST00000437340 SH3RF2Q8TEC5 729 aa25.63■■□□□ 1.69
CPNE1-216ENST00000437340 AGAP11Q8TF27 550 aa25.63■■□□□ 1.69
CPNE1-216ENST00000437340 PIH1D2Q8WWB5 315 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms