RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 PLA2G15Q8NCC3 412 aa7.77□□□□□ -1.17
VPS50-203ENST00000436177 GPR156Q8NFN8 814 aa7.77□□□□□ -1.17
VPS50-203ENST00000436177 FNIP1Q8TF40 1166 aa7.77□□□□□ -1.17
VPS50-203ENST00000436177 SNRNP27Q8WVK2 155 aaKnown RBP7.77□□□□□ -1.17
VPS50-203ENST00000436177 FUBP1Q96AE4 644 aaKnown RBP7.77□□□□□ -1.17
VPS50-203ENST00000436177 PRR11Q96HE9 360 aaPredicted RBP7.77□□□□□ -1.17
VPS50-203ENST00000436177 PSKH2Q96QS6 385 aa7.77□□□□□ -1.17
VPS50-203ENST00000436177 KCTD15Q96SI1 283 aaPredicted RBP7.77□□□□□ -1.17
VPS50-203ENST00000436177 FAM117AQ9C073 453 aa7.77□□□□□ -1.17
VPS50-203ENST00000436177 CDH19Q9H159 772 aa7.77□□□□□ -1.17
VPS50-203ENST00000436177 LMBRD1Q9NUN5 540 aa7.77□□□□□ -1.17
VPS50-203ENST00000436177 LRIT1Q9P2V4 623 aa7.77□□□□□ -1.17
VPS50-203ENST00000436177 MYO1AQ9UBC5 1043 aa7.77□□□□□ -1.17
VPS50-203ENST00000436177 B4GALT6Q9UBX8 382 aa7.77□□□□□ -1.17
VPS50-203ENST00000436177 CNOT8Q9UFF9 292 aaKnown RBP7.77□□□□□ -1.17
VPS50-203ENST00000436177 APPL1Q9UKG1 709 aa7.77□□□□□ -1.17
VPS50-203ENST00000436177 DOCK9Q9BZ29 2069 aa7.77□□□□□ -1.17
VPS50-203ENST00000436177 MYLKQ15746 1914 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 TMEM202A6NGA9 273 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 TMEM191CA6NGB0 347 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 LRRC53A6NM62 1247 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 SMTNL1A8MU46 457 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 B8ZZF3 427 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 NVLO15381 856 aaKnown RBP7.76□□□□□ -1.17
VPS50-203ENST00000436177 SLC28A2O43868 658 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 CPNE6O95741 557 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 FTLP02792 175 aaPredicted RBP7.76□□□□□ -1.17
VPS50-203ENST00000436177 HOXC4P09017 264 aaPredicted RBP7.76□□□□□ -1.17
VPS50-203ENST00000436177 PNLIPP16233 465 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 CA4P22748 312 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 ALDH4A1P30038 563 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 SSR1P43307 286 aaKnown RBP7.76□□□□□ -1.17
VPS50-203ENST00000436177 GNPDA1P46926 289 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 HCAR3P49019 387 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 ATP1A2P50993 1020 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 MAPK10P53779 464 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 EPHB1P54762 984 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 TPM4P67936 248 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 RALGDSQ12967 914 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 KRT81Q14533 505 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 CA9Q16790 459 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 AFMIDQ63HM1 303 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 PNCKQ6P2M8 343 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 DOK6Q6PKX4 331 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 SLC30A9Q6PML9 568 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 CLEC17AQ6ZS10 378 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 RBM43Q6ZSC3 357 aaKnown RBP7.76□□□□□ -1.17
VPS50-203ENST00000436177 PIM3Q86V86 326 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 HEATR4Q86WZ0 1026 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 ZSWIM9Q86XI8 627 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 NPWQ8N729 165 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 ZNF511Q8NB15 262 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 HSPH1Q92598 858 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 ECHDC3Q96DC8 303 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 SGF29Q96ES7 293 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 TMEM168Q9H0V1 697 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 MRPL40Q9NQ50 206 aaKnown RBP7.76□□□□□ -1.17
VPS50-203ENST00000436177 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.76□□□□□ -1.17
VPS50-203ENST00000436177 TAS2R14Q9NYV8 317 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 TTLL3Q9Y4R7 772 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 RNF215Q9Y6U7 377 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 DOCK4Q8N1I0 1966 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 ATMQ13315 3056 aa7.76□□□□□ -1.17
VPS50-203ENST00000436177 TENM4Q6N022 2769 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 PRAMEF33A0A0G2JMD5 474 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 A0A1W2PQM1 296 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 LRRC10BA6NIK2 292 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 NOBOXO60393 691 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 PRAMEF10O60809 474 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 LRCH4O75427 683 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 HEXIM1O94992 359 aaKnown RBP7.75□□□□□ -1.17
VPS50-203ENST00000436177 SERPINC1P01008 464 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 ITGB2P05107 769 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 SFTPCP11686 197 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 GZMAP12544 262 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 CCNB1P14635 433 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 CD82P27701 267 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 PCK1P35558 622 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 ACTR1BP42025 376 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 MMP13P45452 471 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 CDH6P55285 790 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 MAZP56270 477 aaKnown RBP7.75□□□□□ -1.17
VPS50-203ENST00000436177 ACTR1AP61163 376 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 TYRO3Q06418 890 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 ITKQ08881 620 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 SLC10A7Q0GE19 358 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 NFATC3Q12968 1075 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 DPYSQ14117 519 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 HLTFQ14527 1009 aaKnown RBP eCLIP7.75□□□□□ -1.17
VPS50-203ENST00000436177 CNGA3Q16281 694 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 CLPPQ16740 277 aaPredicted RBP7.75□□□□□ -1.17
VPS50-203ENST00000436177 SMTNL2Q2TAL5 461 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 BOLA3Q53S33 107 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 RALGPS1Q5JS13 557 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 ARMC12Q5T9G4 340 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 MARC1Q5VT66 337 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 PCSK4Q6UW60 755 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 XKR5Q6UX68 686 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 ARHGAP36Q6ZRI8 547 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 IRF2BP2Q7Z5L9 587 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms