RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 A0A0D9SEW6 157 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 PRSS51A0A1B0GVH4 220 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 CCDC189A1A4V9 331 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 H7C4K7 107 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 ACSL4O60488 711 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 ALDH2P05091 517 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 ATF6P18850 670 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 SLC6A4P31645 630 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 MSX2P35548 267 aaPredicted RBP18.57■□□□□ 0.56
CLK1-205ENST00000434813 GNA12Q03113 381 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 ELAVL2Q12926 359 aaKnown RBP18.57■□□□□ 0.56
CLK1-205ENST00000434813 DUSP4Q13115 394 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 MMEL1Q495T6 779 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 CLEC6AQ6EIG7 209 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 LARP4Q71RC2 724 aaKnown RBP eCLIP18.57■□□□□ 0.56
CLK1-205ENST00000434813 CFAP52Q8N1V2 620 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 CATSPER1Q8NEC5 780 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 SEPT8Q92599 483 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 TOP1MTQ969P6 601 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 DCUN1D1Q96GG9 259 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 LRGUKQ96M69 825 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 PSKH2Q96QS6 385 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 DDX50Q9BQ39 737 aaKnown RBP18.57■□□□□ 0.56
CLK1-205ENST00000434813 SLC25A23Q9BV35 468 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 SEPT3Q9UH03 358 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 PCDHB7Q9Y5E2 793 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 SLC38A8A6NNN8 435 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 FBP2O00757 339 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 GPC4O75487 556 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 PIRTP0C851 137 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 CCL5P13501 91 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 GATMP50440 423 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 ZNF140P52738 457 aaPredicted RBP18.57■□□□□ 0.56
CLK1-205ENST00000434813 PDAP1Q13442 181 aaKnown RBP18.57■□□□□ 0.56
CLK1-205ENST00000434813 GRM2Q14416 872 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 AGKQ53H12 422 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 FOXB2Q5VYV0 432 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 PTGR2Q8N8N7 351 aaPredicted RBP18.57■□□□□ 0.56
CLK1-205ENST00000434813 GIPC2Q8TF65 315 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 TFB2MQ9H5Q4 396 aaKnown RBP18.57■□□□□ 0.56
CLK1-205ENST00000434813 NLE1Q9NVX2 485 aaPredicted RBP18.57■□□□□ 0.56
CLK1-205ENST00000434813 OGDHLQ9ULD0 1010 aa18.57■□□□□ 0.56
CLK1-205ENST00000434813 CAPN8A6NHC0 703 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 CRTAMO95727 393 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 SNRPB2P08579 225 aaKnown RBP18.56■□□□□ 0.56
CLK1-205ENST00000434813 ACADVLP49748 655 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 CDH4P55283 916 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 UGT3A2Q3SY77 523 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 ANKS3Q6ZW76 656 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 CLYBLQ8N0X4 340 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 OR7D4Q8NG98 312 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 CDKN2AIPNLQ96HQ2 116 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 KLHL32Q96NJ5 620 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 ATOH8Q96SQ7 321 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 HACD3Q9P035 362 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 CCDC167Q9P0B6 97 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 EPS15L1Q9UBC2 864 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 DNMT3LQ9UJW3 386 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 LRFN2Q9ULH4 789 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 H3BNC9 293 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 ENPP3O14638 875 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 CAPNS1P04632 268 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 PMLP29590 882 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 CCNHP51946 323 aaPredicted RBP18.56■□□□□ 0.56
CLK1-205ENST00000434813 OR4D1Q15615 310 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 IL31Q6EBC2 164 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 AFTPHQ6ULP2 937 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 HACD2Q6Y1H2 254 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 RAB44Q7Z6P3 723 aaPredicted RBP18.56■□□□□ 0.56
CLK1-205ENST00000434813 TICAM1Q8IUC6 712 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 ST13P4Q8IZP2 240 aaPredicted RBP18.56■□□□□ 0.56
CLK1-205ENST00000434813 LILRA2Q8N149 483 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 PCDH20Q8N6Y1 951 aaKnown RBP18.56■□□□□ 0.56
CLK1-205ENST00000434813 ADCY4Q8NFM4 1077 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 EXT2Q93063 718 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 CINPQ9BW66 212 aaPredicted RBP18.56■□□□□ 0.56
CLK1-205ENST00000434813 ADA2Q9NZK5 511 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 HCSTQ9UBK5 93 aa18.56■□□□□ 0.56
CLK1-205ENST00000434813 UBA2Q9UBT2 640 aaPredicted RBP18.56■□□□□ 0.56
CLK1-205ENST00000434813 E7ENX8 843 aa18.55■□□□□ 0.56
CLK1-205ENST00000434813 H3BMM5 538 aa18.55■□□□□ 0.56
CLK1-205ENST00000434813 TRIM24O15164 1050 aa18.55■□□□□ 0.56
CLK1-205ENST00000434813 CDK14O94921 469 aa18.55■□□□□ 0.56
CLK1-205ENST00000434813 FGF4P08620 206 aa18.55■□□□□ 0.56
CLK1-205ENST00000434813 MTHFD2P13995 350 aa18.55■□□□□ 0.56
CLK1-205ENST00000434813 TSPAN8P19075 237 aa18.55■□□□□ 0.56
CLK1-205ENST00000434813 ATP5C1P36542 298 aaKnown RBP18.55■□□□□ 0.56
CLK1-205ENST00000434813 SLC11A2P49281 568 aa18.55■□□□□ 0.56
CLK1-205ENST00000434813 ATN1P54259 1190 aaPredicted RBP18.55■□□□□ 0.56
CLK1-205ENST00000434813 FOLH1Q04609 750 aa18.55■□□□□ 0.56
CLK1-205ENST00000434813 C8orf82Q6P1X6 216 aaPredicted RBP18.55■□□□□ 0.56
CLK1-205ENST00000434813 FBXL19Q6PCT2 694 aa18.55■□□□□ 0.56
CLK1-205ENST00000434813 FAM43BQ6ZT52 329 aaPredicted RBP18.55■□□□□ 0.56
CLK1-205ENST00000434813 PIP4K2CQ8TBX8 421 aa18.55■□□□□ 0.56
CLK1-205ENST00000434813 CEP295NLQ96MC4 621 aa18.55■□□□□ 0.56
CLK1-205ENST00000434813 GBP5Q96PP8 586 aa18.55■□□□□ 0.56
CLK1-205ENST00000434813 TSC22D3Q99576 134 aa18.55■□□□□ 0.56
CLK1-205ENST00000434813 SPAG4Q9NPE6 437 aa18.55■□□□□ 0.56
CLK1-205ENST00000434813 ACTL7AQ9Y615 435 aa18.55■□□□□ 0.56
CLK1-205ENST00000434813 ZFP37Q9Y6Q3 630 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms